C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 566
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088785 Zfp566-001 ENSMUSG00000078768 10090 - 7:30077337-30090527 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088785
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088785 0.889±0.40 0.276±0.16 1.860±0.07 4.203±0.47 0.431±0.11 0.292±0.15 0.367±0.08 0.379±0.07 0.539±0.40 0.624±0.13 1.229±0.13 1.351±1.13 1.546±0.84 0.283±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DS CIL_0006DS_0002 CGP 7:30054489-30090410
CIL_000465 CIL_000465_0002 CGP 7:30077337-30107622

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124603 BX324216.1-201 protein_coding Danio_rerio 0.000009 57
ENST00000221355 ZNF780B-001 protein_coding Homo_sapiens 2e-19 102
ENST00000292579 ZNF250-001 protein_coding Homo_sapiens 2e-21 110
ENST00000304239 ZNF420-002 protein_coding Homo_sapiens 0 193
ENST00000316433 ZNF540-002 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000324394 ZNF404-201 protein_coding Homo_sapiens 7e-17 94
ENST00000324461 ZNF283-201 protein_coding Homo_sapiens 3.00004e-41 174
ENST00000337995 ZNF420-001 protein_coding Homo_sapiens 0 193
ENST00000339503 ZNF573-201 protein_coding Homo_sapiens 8e-27 126
ENST00000340963 ZNF780A-201 protein_coding Homo_sapiens 5e-21 108
ENST00000343381 ZNF669-001 protein_coding Homo_sapiens 0.0000000003 71
ENST00000343599 ZNF540-004 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000347077 ZNF546-001 protein_coding Homo_sapiens 2e-21 110
ENST00000357309 ZNF573-202 protein_coding Homo_sapiens 8e-27 126
ENST00000358067 ZNF329-201 protein_coding Homo_sapiens 1e-31 143
ENST00000360357 ZNF461-002 protein_coding Homo_sapiens 9.80909e-45 185
ENST00000392138 ZNF573-004 protein_coding Homo_sapiens 9e-27 126
ENST00000392161 ZFP82-001 protein_coding Homo_sapiens 5e-35 154
ENST00000392170 ZNF566-001 protein_coding Homo_sapiens 8.00141e-43 180
ENST00000396893 ZNF461-003 nonsense_mediated_decay Homo_sapiens 1.96182e-44 185
ENST00000414720 ZNF780A-002 protein_coding Homo_sapiens 3e-21 108
ENST00000417550 ZNF250-005 protein_coding Homo_sapiens 8e-22 110
ENST00000420450 ZNF345-001 protein_coding Homo_sapiens 0 303
ENST00000424129 ZNF566-002 protein_coding Homo_sapiens 8.00141e-43 180
ENST00000427002 ZNF566-009 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000434248 ZNF780B-002 protein_coding Homo_sapiens 6e-19 102
ENST00000434377 ZNF566-201 protein_coding Homo_sapiens 1.00053e-42 180
ENST00000444149 ZNF879-001 protein_coding Homo_sapiens 4e-17 95
ENST00000448299 ZNF669-005 protein_coding Homo_sapiens 0.0000000003 71
ENST00000450241 ZNF780A-001 protein_coding Homo_sapiens 1e-20 108
ENST00000452939 ZNF566-008 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000455521 ZNF780A-202 protein_coding Homo_sapiens 5e-21 108
ENST00000460937 ZNF566-006 retained_intron Homo_sapiens 2.00386e-43 180
ENST00000480361 ZNF566-005 retained_intron Homo_sapiens 9.94922e-44 180
ENST00000500161 ZNF329-002 nonsense_mediated_decay Homo_sapiens 1e-31 143
ENST00000529555 ZNF345-003 protein_coding Homo_sapiens 0 303
ENST00000536220 ZNF573-203 protein_coding Homo_sapiens 9e-27 126
ENST00000540605 ZNF461-005 processed_transcript Homo_sapiens 9.80909e-45 185
ENST00000586134 ZNF540-003 protein_coding Homo_sapiens 0.00000000000001 86
ENST00000586155 ZNF573-006 nonsense_mediated_decay Homo_sapiens 9e-27 126
ENST00000587220 ZNF540-007 processed_transcript Homo_sapiens 0.000000000000004 86
ENST00000587539 ZNF404-001 protein_coding Homo_sapiens 7e-17 94
ENST00000588268 ZNF461-001 protein_coding Homo_sapiens 1.96182e-44 185
ENST00000588797 ZNF283-002 protein_coding Homo_sapiens 3.00004e-41 174
ENST00000589046 ZNF345-010 protein_coding Homo_sapiens 0 303
ENST00000589117 ZNF540-001 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000589632 ZNF573-008 nonsense_mediated_decay Homo_sapiens 9e-27 126
ENST00000590414 ZNF573-007 protein_coding Homo_sapiens 8e-27 126
ENST00000590487 ZNF461-004 retained_intron Homo_sapiens 9.80909e-45 185
ENST00000590588 ZNF540-008 protein_coding Homo_sapiens 0.000000000000003 86
ENST00000590993 ZFP82-003 retained_intron Homo_sapiens 1e-34 154
ENST00000592533 ZNF540-009 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000593605 ZNF780B-004 protein_coding Homo_sapiens 3e-20 102
ENST00000594395 ZNF780A-008 protein_coding Homo_sapiens 3e-21 108
ENST00000594811 ZNF780B-003 retained_intron Homo_sapiens 3e-20 102
ENST00000595687 ZNF780A-009 protein_coding Homo_sapiens 5e-21 108
ENST00000595773 ZNF780A-004 protein_coding Homo_sapiens 7e-22 108
ENST00000595995 ZNF780B-006 non_stop_decay Homo_sapiens 2e-20 102
ENST00000597186 ZNF329-003 protein_coding Homo_sapiens 1e-31 143
ENST00000598312 ZNF329-001 protein_coding Homo_sapiens 1e-31 143
ENST00000598845 ZNF780B-005 protein_coding Homo_sapiens 2e-20 102
ENST00000599368 ZNF780A-006 non_stop_decay Homo_sapiens 9e-22 108
ENST00000599972 ZNF780A-005 protein_coding Homo_sapiens 7e-22 108
ENST00000600094 ZNF546-002 protein_coding Homo_sapiens 1e-21 110
ENST00000601688 ZNF780A-003 non_stop_decay Homo_sapiens 6e-22 108
ENST00000601715 ZNF780A-007 non_stop_decay Homo_sapiens 6e-22 108
ENST00000602828 ZNF658B-002 transcribed_unprocessed_pseudogene Homo_sapiens 4e-27 128
ENST00000612719 ZNF345-201 protein_coding Homo_sapiens 0 303
ENST00000612867 ZNF658-001 protein_coding Homo_sapiens 2e-30 139
ENST00000614069 ZNF345-202 protein_coding Homo_sapiens 0 303
ENST00000614133 ZNF461-201 protein_coding Homo_sapiens 9.80909e-45 185
ENST00000615961 ZNF658B-001 processed_transcript Homo_sapiens 4e-27 128
ENST00000617676 ZNF780B-201 protein_coding Homo_sapiens 6e-19 102
ENST00000618437 ZNF461-202 protein_coding Homo_sapiens 3.00018e-42 176
ENST00000618787 ZNF283-001 protein_coding Homo_sapiens 8.00001e-41 174
ENST00000621410 ZNF658-201 protein_coding Homo_sapiens 2e-30 139

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