C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphatidylinositol glycan anchor biosynthesis, class X
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415832 PIGX-003 ENSG00000163964 9606 + 3:196712671-196734289 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverOvaryENST00000415832
Transcript ID Breast Heart Liver Ovary
ENST00000415832 0.572±0.00 0.397±0.00 0.748±0.00 1.299±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003O8 CIL_0003O8_0002 CGP 3:196639775-196736007

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006506 IEA GPI anchor biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189013 Pigx-201 protein_coding Mus_musculus 0 239
ENSMUST00000135677 Pigx-005 retained_intron Mus_musculus 0 239
ENSMUST00000155966 Pigx-002 protein_coding Mus_musculus 0 239
ENSMUST00000096109 Pigx-001 protein_coding Mus_musculus 0 239
ENSMUST00000147688 Pigx-010 nonsense_mediated_decay Mus_musculus 0 237

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