C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, J
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418331 PTPRJ-001 ENSG00000149177 9606 + 11:47980561-48168118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryENST00000418331
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENST00000418331 4.955±0.00 3.082±0.00 4.002±0.00 2.166±0.00 0.632±0.00 6.016±0.00 2.080±0.00 3.647±0.00 4.451±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001570 IEA vasculogenesis
GO:0001772 IDA immunological synapse
GO:0001954 IEA positive regulation of cell-matrix adhesion
GO:0004725 IDA:IEA protein tyrosine phosphatase activity
GO:0005161 IPI platelet-derived growth factor receptor binding
GO:0005515 IPI:IEA protein binding
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005911 IDA cell-cell junction
GO:0006470 IEA protein dephosphorylation
GO:0007507 IEA heart development
GO:0007596 IEA blood coagulation
GO:0008013 IPI beta-catenin binding
GO:0008285 IDA negative regulation of cell proliferation
GO:0009986 IDA cell surface
GO:0010572 IEA positive regulation of platelet activation
GO:0010642 IDA negative regulation of platelet-derived growth factor receptor signaling pathway
GO:0010759 IEA positive regulation of macrophage chemotaxis
GO:0016311 IEA dephosphorylation
GO:0016791 IMP:IEA phosphatase activity
GO:0019901 IPI protein kinase binding
GO:0030155 IMP regulation of cell adhesion
GO:0030308 IDA negative regulation of cell growth
GO:0030336 IDA negative regulation of cell migration
GO:0032587 IEA ruffle membrane
GO:0035335 IDA peptidyl-tyrosine dephosphorylation
GO:0042059 IMP negative regulation of epidermal growth factor receptor signaling pathway
GO:0042995 IEA cell projection
GO:0043116 IDA negative regulation of vascular permeability
GO:0043407 IDA negative regulation of MAP kinase activity
GO:0045295 IPI gamma-catenin binding
GO:0045785 IMP positive regulation of cell adhesion
GO:0048008 IMP platelet-derived growth factor receptor signaling pathway
GO:0048709 IEA oligodendrocyte differentiation
GO:0050860 IMP negative regulation of T cell receptor signaling pathway
GO:0050918 IDA positive chemotaxis
GO:0051019 IPI mitogen-activated protein kinase binding
GO:0051894 IMP positive regulation of focal adhesion assembly
GO:0051897 IMP positive regulation of protein kinase B signaling
GO:0051898 IMP negative regulation of protein kinase B signaling
GO:0060242 NAS contact inhibition
GO:0070062 IDA extracellular vesicular exosome
GO:0070097 IPI delta-catenin binding
GO:2000272 IEA negative regulation of receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168621 Ptprj-201 protein_coding Mus_musculus 0 2560
ENSMUST00000111493 Ptprj-001 protein_coding Mus_musculus 0 2560
ENSMUST00000111495 Ptprj-002 protein_coding Mus_musculus 0 2316
ENSMUST00000124074 Gm13767-001 processed_pseudogene Mus_musculus 0 941
ENSMUST00000116469 Gm13768-001 unprocessed_pseudogene Mus_musculus 0 669
ENSDART00000149991 ptprja-001 protein_coding Danio_rerio 4e-33 148
ENSDART00000016087 ptprja-201 protein_coding Danio_rerio 2e-26 126

Loading