C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418390 TCEB3-001 ENSG00000011007 9606 + 1:23743155-23762059 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverOvaryPlacentaTestisENST00000418390
Transcript ID Adipose Adrenal Breast Kidney Liver Ovary Placenta Testis
ENST00000418390 3.555±0.00 3.068±0.00 6.022±0.00 2.145±0.00 4.597±0.00 5.349±0.00 1.556±0.62 2.669±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WC CIL_0002WC_0002 CGP 1:23743155-23788232

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0016021 IEA integral component of membrane
GO:0016032 TAS viral process
GO:0050434 TAS positive regulation of viral transcription

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030427 Tceb3-001 protein_coding Mus_musculus 0 2495

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