C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ABI family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419580 ABI3-002 ENSG00000108798 9606 + 17:49210411-49223036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000419580
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000419580 2.536±0.00 8.522±0.00 0.885±0.77 2.573±0.00 1.312±0.00 0.223±0.00 0.581±0.00 3.347±1.54 0.284±0.12 1.390±0.40 2.319±1.19 1.486±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MX CIL_0004MX_0002 CGP 17:49132460-49210574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005622 IDA intracellular
GO:0005737 IDA:IEA cytoplasm
GO:0006928 NAS cellular component movement
GO:0016020 IDA membrane
GO:0030027 IDA lamellipodium
GO:0030334 IDA regulation of cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059026 Abi3-001 protein_coding Mus_musculus 0 1092
ENSMUST00000131049 Abi3-002 processed_transcript Mus_musculus 0 776
ENSMUST00000133070 Zfp652-003 nonsense_mediated_decay Mus_musculus 0 272
ENSMUST00000143492 Abi3-004 processed_transcript Mus_musculus 1.99965e-42 178

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