C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: MCF.2 cell line derived transforming sequence-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420013 MCF2L-010 ENSG00000126217 9606 + 13:113089636-113096832 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014E CIL_00014E_0001 CGP 13:112690329-113099739
CIL_0000RV CIL_0000RV_0001 CGP 13:112894378-113120681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139776 Mcf2l-021 protein_coding Mus_musculus 0 472
ENSMUST00000126905 Mcf2l-008 protein_coding Mus_musculus 0 412
ENSMUST00000145067 Mcf2l-006 protein_coding Mus_musculus 0 411
ENSMUST00000110876 Mcf2l-001 protein_coding Mus_musculus 0 351
ENSMUST00000134227 Mcf2l-015 protein_coding Mus_musculus 0 252
ENSMUST00000127229 Mcf2l-012 retained_intron Mus_musculus 9.80909e-45 183

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