C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000RV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000126217-ENSG00000057593 CGP 9606 13:112894378-113120681
GeneTranscriptPositionBiotype
ENSG00000057593 (F7)
coagulation factor VII (serum prothrombin conversion accelerator) 		ENST00000346342 (F7-002) 113105791-113120031 protein_coding
ENST00000375581 (F7-001) 113105807-113120681 protein_coding
ENST00000444337 (F7-004) 113105839-113116788 nonsense_mediated_decay
ENST00000473085 (F7-005) 113110679-113114903 processed_transcript
ENST00000479674 (F7-003) 113110340-113116835 retained_intron
ENST00000541084 (F7-201) 113105788-113120678 protein_coding
ENSG00000126217 (MCF2L)
MCF.2 cell line derived transforming sequence-like 		ENST00000261963 (MCF2L-034) 113087350-113098388 protein_coding
ENST00000375597 (MCF2L-003) 113001754-113090183 protein_coding
ENST00000375604 (MCF2L-201) 113001714-113099735 protein_coding
ENST00000375608 (MCF2L-001) 112894378-113096861 protein_coding
ENST00000397017 (MCF2L-033) 113074467-113098208 protein_coding
ENST00000397021 (MCF2L-007) 113044662-113046855 protein_coding
ENST00000397024 (MCF2L-018) 113001893-113027068 protein_coding
ENST00000397030 (MCF2L-002) 112968500-113099739 protein_coding
ENST00000397036 (MCF2L-015) 112902195-112910619 protein_coding
ENST00000409954 (MCF2L-030) 113001270-113064311 protein_coding
ENST00000413354 (MCF2L-011) 113086188-113096399 protein_coding
ENST00000420013 (MCF2L-010) 113089636-113096832 protein_coding
ENST00000421756 (MCF2L-024) 112979312-113096487 protein_coding
ENST00000423251 (MCF2L-023) 113044851-113065303 protein_coding
ENST00000433807 (MCF2L-025) 112985118-113024754 protein_coding
ENST00000439475 (MCF2L-012) 113087796-113094604 protein_coding
ENST00000441756 (MCF2L-014) 113089691-113095178 protein_coding
ENST00000442625 (MCF2L-016) 112902195-112958164 nonsense_mediated_decay
ENST00000453297 (MCF2L-029) 113087399-113097669 protein_coding
ENST00000464800 (MCF2L-009) 113064312-113070394 retained_intron
ENST00000469415 (MCF2L-021) 113093601-113098548 retained_intron
ENST00000469558 (MCF2L-022) 113044462-113045322 processed_transcript
ENST00000473345 (MCF2L-008) 113024698-113052753 protein_coding
ENST00000475524 (MCF2L-026) 113064690-113075026 processed_transcript
ENST00000480321 (MCF2L-032) 113040348-113047341 processed_transcript
ENST00000486210 (MCF2L-031) 113001785-113024908 retained_intron
ENST00000486806 (MCF2L-019) 113024664-113034137 protein_coding
ENST00000487354 (MCF2L-027) 113084567-113086165 retained_intron
ENST00000488765 (MCF2L-020) 113095222-113098546 retained_intron
ENST00000491028 (MCF2L-028) 113090969-113094859 retained_intron
ENST00000494043 (MCF2L-006) 113044688-113054905 processed_transcript
ENST00000535094 (MCF2L-005) 112969221-113097074 protein_coding
ENSG00000235280 (MCF2L-AS1)
MCF2L antisense RNA 1 		ENST00000446789 (MCF2L-AS1-001) 112967484-112968824 antisense
ENSG00000267868 (RP11-120K24.3)
 ENST00000602192 (RP11-120K24.3-001) 112964835-112966131 lincRNA
ENSG00000269356 (RP11-120K24.4)
 ENST00000601559 (RP11-120K24.4-001) 113008778-113009424 sense_intronic
ENSG00000269376 (RP11-120K24.5)
 ENST00000598534 (RP11-120K24.5-001) 113009671-113010319 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0000RV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031442-ENSMUSG00000031443 CGP 10090 8:12873806-13035809
GeneTranscriptPositionBiotype
ENSMUSG00000031442 (Mcf2l)
mcf.2 transforming sequence-like 		ENSMUST00000095456 (Mcf2l-009) 12873827-13019053 protein_coding
ENSMUST00000098927 (Mcf2l-019) 12926632-13018177 protein_coding
ENSMUST00000110866 (Mcf2l-004) 12949484-13020501 protein_coding
ENSMUST00000110867 (Mcf2l-003) 12949416-13019275 protein_coding
ENSMUST00000110871 (Mcf2l-017) 12947953-13014029 protein_coding
ENSMUST00000110873 (Mcf2l-018) 12984276-13017468 protein_coding
ENSMUST00000110876 (Mcf2l-001) 12915893-13020509 protein_coding
ENSMUST00000110879 (Mcf2l-014) 12915975-13019309 protein_coding
ENSMUST00000123811 (Mcf2l-022) 13011494-13020527 protein_coding
ENSMUST00000126905 (Mcf2l-008) 13000759-13020505 protein_coding
ENSMUST00000127229 (Mcf2l-012) 13013062-13015365 retained_intron
ENSMUST00000130302 (Mcf2l-005) 12947919-12988152 retained_intron
ENSMUST00000134227 (Mcf2l-015) 13011510-13018094 protein_coding
ENSMUST00000134989 (Mcf2l-013) 13017176-13019007 retained_intron
ENSMUST00000138387 (Mcf2l-011) 12873948-12890108 processed_transcript
ENSMUST00000139776 (Mcf2l-021) 13013561-13018999 protein_coding
ENSMUST00000145067 (Mcf2l-006) 12984296-13020505 protein_coding
ENSMUST00000145892 (Mcf2l-020) 13011818-13017439 protein_coding
ENSMUST00000156405 (Mcf2l-002) 12915911-12992161 processed_transcript
ENSMUST00000156560 (Mcf2l-010) 12873806-12880146 protein_coding
ENSMUST00000173006 (Mcf2l-007) 12984281-13011546 protein_coding
ENSMUST00000173099 (Mcf2l-016) 12915256-13020905 protein_coding
ENSMUSG00000031443 (F7)
coagulation factor VII 		ENSMUST00000033820 (F7-001) 13026034-13035809 protein_coding
ENSMUSG00000081951 (Gm15352)
predicted gene 15352 		ENSMUST00000118696 (Gm15352-001) 13021941-13022210 processed_pseudogene
ENSMUSG00000082682 (Gm15349)
predicted gene 15349 		ENSMUST00000121154 (Gm15349-001) 12971826-12972029 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000RV_0001ENSG00000057593ENST00000346342ENST00000375581ENST00000444337ENST00000473085ENST00000479674ENST00000541084ENSG00000126217ENST00000261963ENST00000375597ENST00000375604ENST00000375608ENST00000397017ENST00000397021ENST00000397024ENST00000397030ENST00000397036ENST00000409954ENST00000413354ENST00000420013ENST00000421756ENST00000423251ENST00000433807ENST00000439475ENST00000441756ENST00000442625ENST00000453297ENST00000464800ENST00000469415ENST00000469558ENST00000473345ENST00000475524ENST00000480321ENST00000486210ENST00000486806ENST00000487354ENST00000488765ENST00000491028ENST00000494043ENST00000535094ENSG00000235280ENST00000446789ENSG00000267868ENST00000602192ENSG00000269356ENST00000601559ENSG00000269376ENST00000598534CIL_0000RV_0002ENSMUSG00000031442ENSMUST00000095456ENSMUST00000098927ENSMUST00000110866ENSMUST00000110867ENSMUST00000110871ENSMUST00000110873ENSMUST00000110876ENSMUST00000110879ENSMUST00000123811ENSMUST00000126905ENSMUST00000127229ENSMUST00000130302ENSMUST00000134227ENSMUST00000134989ENSMUST00000138387ENSMUST00000139776ENSMUST00000145067ENSMUST00000145892ENSMUST00000156405ENSMUST00000156560ENSMUST00000173006ENSMUST00000173099ENSMUSG00000031443ENSMUST00000033820ENSMUSG00000081951ENSMUST00000118696ENSMUSG00000082682ENSMUST00000121154
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000RV_0001ENSG00000057593ENST00000346342ENST00000444337ENST00000473085ENST00000541084ENSG00000126217ENST00000261963ENST00000375597ENST00000375604ENST00000397017ENST00000397030ENST00000397036ENST00000413354ENST00000421756ENST00000469415ENST00000488765ENST00000535094ENSG00000235280ENST00000446789ENSG00000267868ENST00000602192ENSG00000269356ENST00000601559ENSG00000269376ENST00000598534CIL_0000RV_0002ENSMUSG00000031442ENSMUST00000095456ENSMUST00000098927ENSMUST00000110866ENSMUST00000110871ENSMUST00000110873ENSMUST00000110876ENSMUST00000123811ENSMUST00000126905ENSMUST00000130302ENSMUST00000134989ENSMUST00000139776ENSMUST00000145892ENSMUST00000156405ENSMUST00000173006ENSMUST00000173099ENSMUSG00000031443ENSMUST00000033820ENSMUSG00000081951ENSMUST00000118696ENSMUSG00000082682ENSMUST00000121154
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000057593 ENST00000346342 0.206±0.00 0.197±0.00 N/A 0.248±0.06 0.074±0.01 0.028±0.00 0.034±0.01 31.529±0.00 58.651±0.00 0.039±0.00 N/A 1.027±1.39 0.181±0.12 1.016±0.08
ENST00000375581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444337 N/A N/A 0.112±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473085 N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A
ENST00000479674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541084 N/A N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.518±0.00 0.074±0.00 0.533±0.00
ENSG00000126217 ENST00000261963 16.212±0.00 3.333±0.00 N/A 14.405±0.00 4.391±2.41 7.295±0.00 5.649±0.00 8.437±0.00 0.921±0.06 1.953±0.00 N/A 2.267±0.99 2.013±1.30 1.416±0.00
ENST00000375597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.699±0.00 N/A N/A
ENST00000375604 N/A N/A N/A N/A 1.009±0.32 0.505±0.00 N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A
ENST00000375608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397017 N/A 1.860±0.00 N/A 3.408±0.00 2.972±0.00 N/A 2.028±0.00 0.115±0.00 0.429±0.00 N/A 0.182±0.00 N/A N/A 0.707±0.00
ENST00000397021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397030 N/A N/A N/A N/A N/A 1.711±0.00 N/A N/A N/A N/A N/A 0.456±0.00 N/A 0.411±0.00
ENST00000397036 N/A N/A N/A N/A N/A N/A N/A 5.845±0.00 N/A N/A N/A N/A N/A N/A
ENST00000409954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.322±0.00
ENST00000420013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421756 13.591±0.00 3.576±0.00 1.400±0.00 4.379±0.00 3.742±1.94 3.518±2.82 3.697±1.51 N/A 1.449±0.00 2.886±0.31 N/A 1.790±0.59 2.543±1.65 1.107±0.00
ENST00000423251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469415 N/A N/A N/A 7.983±0.00 N/A 1.037±0.00 N/A N/A N/A 2.925±0.00 0.700±0.07 1.367±0.55 2.167±0.00 N/A
ENST00000469558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488765 N/A 2.181±0.00 N/A N/A N/A N/A N/A 0.303±0.00 N/A N/A N/A 2.289±0.00 N/A N/A
ENST00000491028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535094 N/A N/A N/A 17.141±0.00 N/A N/A N/A N/A N/A N/A 1.087±0.00 5.040±3.62 0.121±0.00 0.510±0.00
ENSG00000235280 ENST00000446789 N/A N/A N/A N/A N/A N/A N/A N/A 2.877±0.00 N/A N/A N/A N/A N/A
ENSG00000267868 ENST00000602192 0.027±0.00 0.014±0.00 0.039±0.00 0.207±0.18 0.233±0.00 0.130±0.02 0.149±0.00 1.032±0.00 0.091±0.00 N/A N/A 0.323±0.23 0.068±0.02 0.235±0.00
ENSG00000269356 ENST00000601559 0.305±0.00 0.030±0.00 1.266±0.00 N/A 0.455±0.37 1.717±0.00 0.212±0.00 N/A 0.604±0.00 0.847±0.00 N/A 0.835±0.15 0.151±0.00 N/A
ENSG00000269376 ENST00000598534 0.209±0.00 N/A N/A 0.562±0.00 0.239±0.20 0.299±0.05 0.275±0.00 0.607±0.00 N/A 0.128±0.09 N/A 3.681±4.19 0.078±0.00 0.069±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031442 ENSMUST00000095456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.585±0.00 N/A 1.282±0.42
ENSMUST00000098927 1.301±0.00 N/A N/A 24.170±0.00 1.801±0.00 N/A 2.254±0.00 N/A N/A N/A 1.244±0.40 4.730±1.78 2.796±2.59 1.963±0.71
ENSMUST00000110866 3.356±1.43 0.867±0.00 N/A N/A 1.160±0.00 5.849±0.14 1.742±0.41 1.495±0.31 0.114±0.05 3.709±0.00 1.025±0.43 0.792±0.02 1.502±0.97 0.627±0.00
ENSMUST00000110867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110871 N/A 0.918±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.973±0.00 N/A 0.786±0.00
ENSMUST00000110873 N/A N/A N/A N/A N/A N/A N/A N/A 0.130±0.00 N/A N/A N/A N/A N/A
ENSMUST00000110876 N/A 0.731±0.11 N/A 15.493±5.02 N/A 5.010±0.00 N/A N/A N/A N/A N/A 0.591±0.00 0.778±0.22 N/A
ENSMUST00000110879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123811 7.808±0.27 N/A 1.151±0.34 11.915±0.00 N/A 9.743±2.63 3.779±0.51 2.331±0.00 0.128±0.08 7.816±1.65 1.940±0.67 3.171±0.18 2.022±0.67 1.020±0.21
ENSMUST00000126905 N/A 1.356±0.21 0.308±0.00 N/A N/A N/A N/A N/A 0.040±0.01 N/A 0.761±0.40 N/A N/A N/A
ENSMUST00000127229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130302 N/A N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A
ENSMUST00000134227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134989 N/A N/A N/A N/A N/A N/A N/A N/A 0.169±0.05 N/A N/A N/A N/A N/A
ENSMUST00000138387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.077±0.00
ENSMUST00000145067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.696±5.80 N/A
ENSMUST00000156405 N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A N/A N/A N/A N/A
ENSMUST00000156560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.877±0.00 1.329±0.00 N/A N/A
ENSMUST00000173099 1.250±0.49 0.532±0.00 N/A N/A 0.972±0.00 2.203±0.25 1.086±0.00 N/A 0.054±0.00 2.730±0.08 N/A 0.808±0.23 N/A N/A
ENSMUSG00000031443 ENSMUST00000033820 0.141±0.06 0.137±0.07 N/A 0.066±0.00 0.526±0.27 0.114±0.04 0.124±0.06 0.134±0.06 51.490±43.63 5.835±2.87 0.027±0.00 0.368±0.16 0.918±0.63 0.718±0.19
ENSMUSG00000081951 ENSMUST00000118696 1.156±0.00 N/A N/A 0.246±0.07 0.830±0.07 N/A 0.597±0.25 0.435±0.15 N/A N/A N/A N/A 0.047±0.00 0.332±0.00
ENSMUSG00000082682 ENSMUST00000121154 N/A N/A N/A 0.301±0.00 N/A N/A N/A N/A N/A 1.928±0.00 N/A N/A N/A N/A

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