C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras homolog enriched in brain like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420065 RHEBL1-003 ENSG00000167550 9606 - 12:49064686-49069947 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000420065
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000420065 0.052±0.00 0.185±0.00 0.274±0.00 0.103±0.00 0.130±0.00 0.116±0.00 0.190±0.08 0.127±0.00 0.251±0.00 0.376±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003S CIL_00003S_0001 CGP 12:49018975-49070025
CIL_00000H CIL_00000H_0001 CGP 12:49064685-49094819

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006184 IEA GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024518 Rhebl1-001 protein_coding Mus_musculus 0 198
ENSMUST00000155699 Rhebl1-003 retained_intron Mus_musculus 4e-27 126
ENSMUST00000147015 Rhebl1-002 processed_transcript Mus_musculus 1e-26 124

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