C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDV3 homolog (mouse)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420115 CDV3-003 ENSG00000091527 9606 + 3:133574457-133590260 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000420115
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000420115 19.282±0.00 6.426±0.00 5.699±0.00 3.308±0.00 1.498±0.00 4.626±0.00 2.930±0.00 9.336±3.57 5.196±0.00 4.298±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0008283 NAS cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072249 Cdv3-005 protein_coding Mus_musculus 0 865
ENSMUST00000116517 Cdv3-003 protein_coding Mus_musculus 0 865
ENSMUST00000190226 Cdv3-004 protein_coding Mus_musculus 0 750
ENSMUST00000035484 Cdv3-001 protein_coding Mus_musculus 0 750
ENSMUST00000189875 Cdv3-007 protein_coding Mus_musculus 0 577
ENSMUST00000189896 Cdv3-002 protein_coding Mus_musculus 0 575
ENSMUST00000179197 Gm20760-201 processed_pseudogene Mus_musculus 0 429
ENSMUST00000094493 Gm13241-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000118892 Gm13148-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000120010 Gm13234-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000122007 Gm13158-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000118609 Gm13223-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000117799 Gm13036-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000169632 Gm7236-201 processed_pseudogene Mus_musculus 0 390
ENSMUST00000116491 Gm14239-001 processed_pseudogene Mus_musculus 0 211
ENSMUST00000117655 Gm13238-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000118508 Gm13146-001 processed_pseudogene Mus_musculus 0 200

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