C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromodomain helicase DNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420239 CHD2-202 ENSG00000279765 9606 + 15:92901238-92949080 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartTestisENST00000420239
Transcript ID Bladder Breast Heart Testis
ENST00000420239 2.722±0.00 3.539±0.00 1.038±0.00 23.449±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001046 ISS core promoter sequence-specific DNA binding
GO:0003677 TAS DNA binding
GO:0004003 TAS ATP-dependent DNA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0007517 ISS muscle organ development
GO:0016568 IEA chromatin modification
GO:0032508 TAS DNA duplex unwinding
GO:0042393 ISS histone binding
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169922 Chd2-001 protein_coding Mus_musculus 0 2010
ENSMUST00000026895 Chd2-005 protein_coding Mus_musculus 0 665
ENSMUST00000172704 Chd2-002 protein_coding Mus_musculus 0 220

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