C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CREB regulated transcription coactivator 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420329 CRTC3-002 ENSG00000140577 9606 + 15:90529925-90645345 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryTestisENST00000420329
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000420329 7.491±0.00 9.975±0.00 6.203±5.30 2.715±0.00 4.996±4.23 2.463±1.32 1.522±1.24 2.681±0.78 18.422±14.62 13.835±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FE CIL_0008FE_0001 VISTA 15:90100149-90701385
CIL_0008AY CIL_0008AY_0001 VISTA 15:90522657-91123707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008140 IEA cAMP response element binding protein binding
GO:0016032 IEA viral process
GO:0032793 IEA positive regulation of CREB transcription factor activity
GO:0051289 IEA protein homotetramerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122255 Crtc3-001 protein_coding Mus_musculus 0 2200
ENSMUST00000152668 Crtc3-002 retained_intron Mus_musculus 0 416
ENSDART00000073903 crtc3-201 protein_coding Danio_rerio 9e-35 154

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