C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420343 MED7-201 ENSG00000155868 9606 - 5:157138442-157142775 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000420343
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000420343 3.298±0.00 2.038±0.00 2.129±0.81 4.094±0.00 1.599±0.00 2.653±0.00 5.873±0.00 2.212±0.00 0.574±0.00 3.740±0.60 4.944±1.40 14.968±1.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000737 CIL_000737_0002 CGP 5:157029413-157142869
CIL_00094M CIL_00094M_0001 VISTA 5:157087063-157688799

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0003713 TAS transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IDA transcription factor complex
GO:0005739 IDA mitochondrion
GO:0006357 IEA:IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0016592 IEA mediator complex
GO:0031965 IDA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170928 Med7-201 protein_coding Mus_musculus 0 1027
ENSMUST00000020665 Med7-004 protein_coding Mus_musculus 0 1027
ENSMUST00000109232 Med7-003 protein_coding Mus_musculus 0 1027
ENSMUST00000109231 Med7-002 protein_coding Mus_musculus 0 763
ENSMUST00000128940 Med7-001 protein_coding Mus_musculus 0 684
ENSMUST00000133635 Med7-008 protein_coding Mus_musculus 0 595
ENSMUST00000152119 Med7-005 protein_coding Mus_musculus 0 442
ENSDART00000015670 med7-001 protein_coding Danio_rerio 0 326
ENSMUST00000140027 Med7-006 protein_coding Mus_musculus 0 300

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