C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PITPNM family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421306 PITPNM3-002 ENSG00000091622 9606 - 17:6451264-6556460 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyMuscleOvaryPlacentaENST00000421306
Transcript ID Adrenal Brain Breast Colon Heart Kidney Muscle Ovary Placenta
ENST00000421306 0.438±0.00 3.659±0.00 0.303±0.00 0.261±0.00 0.071±0.00 0.351±0.00 0.023±0.00 1.240±0.00 0.145±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RM CIL_0000RM_0001 CGP 17:6393693-6451469
CIL_00007K CIL_00007K_0001 CGP 17:6444415-6556494
CIL_0006SQ CIL_0006SQ_0002 CGP 17:6451264-6640927

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 TAS calcium ion binding
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0008289 IEA lipid binding
GO:0008526 TAS phosphatidylinositol transporter activity
GO:0015914 TAS phospholipid transport
GO:0016021 TAS integral component of membrane
GO:0030971 TAS receptor tyrosine kinase binding
GO:0046488 TAS phosphatidylinositol metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075258 Pitpnm3-001 protein_coding Mus_musculus 0 3594
ENSMUST00000108508 Pitpnm3-005 protein_coding Mus_musculus 0 3539
ENSMUST00000142471 Pitpnm3-004 retained_intron Mus_musculus 0 933
ENSMUST00000132781 Pitpnm3-003 retained_intron Mus_musculus 0 593
ENSMUST00000134210 Pitpnm3-002 processed_transcript Mus_musculus 0 547
ENSMUST00000099060 Gcnt7-001 protein_coding Mus_musculus 0.000003 60

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