C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006SQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055255-ENSDARG00000034227 CGP 7955 15:26015175-26222785
GeneTranscriptPositionBiotype
ENSDARG00000055255 (pitpnm3)
PITPNM family member 3 		ENSDART00000077582 (pitpnm3-001) 26015175-26180348 protein_coding
CIL_0006SQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000091622-ENSG00000198920 CGP 9606 17:6451264-6640927
GeneTranscriptPositionBiotype
ENSG00000091622 (PITPNM3)
PITPNM family member 3 		ENST00000262483 (PITPNM3-001) 6451265-6556494 protein_coding
ENST00000421306 (PITPNM3-002) 6451264-6556460 protein_coding
ENST00000572795 (PITPNM3-003) 6455400-6481829 retained_intron
ENST00000575201 (PITPNM3-005) 6460569-6463881 protein_coding
ENST00000576664 (PITPNM3-004) 6455391-6473216 processed_transcript
ENSG00000129195 (FAM64A)
family with sequence similarity 64, member A 		ENST00000250056 (FAM64A-008) 6444441-6451065 protein_coding
ENST00000570337 (FAM64A-013) 6444443-6450365 protein_coding
ENST00000571373 (FAM64A-012) 6444443-6449938 protein_coding
ENST00000571572 (FAM64A-006) 6447495-6450595 protein_coding
ENST00000572447 (FAM64A-009) 6444415-6451469 protein_coding
ENST00000572595 (FAM64A-003) 6444446-6451055 protein_coding
ENST00000573385 (FAM64A-011) 6447347-6449549 retained_intron
ENST00000573557 (FAM64A-010) 6444442-6450441 nonsense_mediated_decay
ENST00000576056 (FAM64A-014) 6444475-6450291 protein_coding
ENSG00000129235 (TXNDC17)
thioredoxin domain containing 17 		ENST00000250101 (TXNDC17-001) 6640758-6644541 protein_coding
ENST00000570330 (TXNDC17-010) 6641016-6643114 protein_coding
ENST00000571029 (TXNDC17-009) 6641658-6643117 processed_transcript
ENST00000571957 (TXNDC17-005) 6641027-6642357 processed_transcript
ENST00000573792 (TXNDC17-008) 6641466-6643120 processed_transcript
ENST00000574429 (TXNDC17-002) 6641024-6643123 retained_intron
ENST00000574734 (TXNDC17-004) 6641034-6643116 nonsense_mediated_decay
ENST00000574838 (TXNDC17-006) 6641043-6643429 protein_coding
ENST00000576020 (TXNDC17-003) 6640985-6643067 processed_transcript
ENST00000577146 (TXNDC17-007) 6641308-6643119 processed_transcript
ENSG00000198920 (KIAA0753)
KIAA0753 		ENST00000361413 (KIAA0753-001) 6578151-6640927 protein_coding
ENST00000542826 (KIAA0753-004) 6579654-6620907 nonsense_mediated_decay
ENST00000570455 (KIAA0753-007) 6634741-6640652 retained_intron
ENST00000570790 (KIAA0753-003) 6579211-6635173 nonsense_mediated_decay
ENST00000571642 (KIAA0753-005) 6628573-6640662 protein_coding
ENST00000572235 (KIAA0753-009) 6620930-6628282 nonsense_mediated_decay
ENST00000572370 (KIAA0753-002) 6579389-6640711 protein_coding
ENST00000573033 (KIAA0753-006) 6628619-6636428 protein_coding
ENST00000575027 (KIAA0753-010) 6589807-6606928 processed_transcript
ENST00000576281 (KIAA0753-011) 6578148-6594999 protein_coding
ENST00000576823 (KIAA0753-008) 6623937-6628487 processed_transcript
ENSG00000274860 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000612122 (Metazoa_SRP.1-301) 6521131-6521412 misc_RNA
CIL_0006SQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040543-ENSMUSG00000020807 CGP 10090 11:72047528-72207459
GeneTranscriptPositionBiotype
ENSMUSG00000020807 (4933427D14Rik)
RIKEN cDNA 4933427D14 gene 		ENSMUST00000108505 (4933427D14Rik-003) 72195375-72207431 protein_coding
ENSMUST00000108506 (4933427D14Rik-001) 72154097-72203771 protein_coding
ENSMUST00000131546 (4933427D14Rik-002) 72153930-72207267 nonsense_mediated_decay
ENSMUST00000142530 (4933427D14Rik-004) 72153929-72207459 nonsense_mediated_decay
ENSMUST00000144553 (4933427D14Rik-006) 72198610-72202612 processed_transcript
ENSMUST00000151411 (4933427D14Rik-008) 72153929-72155303 processed_transcript
ENSMUST00000154093 (4933427D14Rik-005) 72198363-72207220 processed_transcript
ENSMUST00000156696 (4933427D14Rik-007) 72155393-72175238 processed_transcript
ENSMUSG00000040543 (Pitpnm3)
PITPNM family member 3 		ENSMUST00000075258 (Pitpnm3-001) 72047528-72135778 protein_coding
ENSMUST00000108508 (Pitpnm3-005) 72047528-72135721 protein_coding
ENSMUST00000132781 (Pitpnm3-003) 72057645-72061561 retained_intron
ENSMUST00000134210 (Pitpnm3-002) 72051109-72052049 processed_transcript
ENSMUST00000142471 (Pitpnm3-004) 72067802-72135778 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SQ_0001ENSDARG00000055255ENSDART00000077582CIL_0006SQ_0002ENSG00000091622ENST00000262483ENST00000421306ENST00000572795ENST00000575201ENST00000576664ENSG00000129195ENST00000250056ENST00000570337ENST00000571373ENST00000571572ENST00000572447ENST00000572595ENST00000573385ENST00000573557ENST00000576056ENSG00000129235ENST00000250101ENST00000570330ENST00000571029ENST00000571957ENST00000573792ENST00000574429ENST00000574734ENST00000574838ENST00000576020ENST00000577146ENSG00000198920ENST00000361413ENST00000542826ENST00000570455ENST00000570790ENST00000571642ENST00000572235ENST00000572370ENST00000573033ENST00000575027ENST00000576281ENST00000576823ENSG00000274860ENST00000612122CIL_0006SQ_0003ENSMUSG00000020807ENSMUST00000108505ENSMUST00000108506ENSMUST00000131546ENSMUST00000142530ENSMUST00000144553ENSMUST00000151411ENSMUST00000154093ENSMUST00000156696ENSMUSG00000040543ENSMUST00000075258ENSMUST00000108508ENSMUST00000132781ENSMUST00000134210ENSMUST00000142471
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SQ_0001ENSDARG00000055255ENSDART00000077582CIL_0006SQ_0002ENSG00000091622ENST00000262483ENST00000421306ENST00000572795ENSG00000129195ENST00000250056ENST00000572447ENST00000573385ENST00000576056ENSG00000129235ENST00000250101ENST00000570330ENST00000571957ENST00000574734ENST00000574838ENST00000576020ENSG00000198920ENST00000361413ENST00000570790ENST00000572370ENST00000576823ENSG00000274860ENST00000612122CIL_0006SQ_0003ENSMUSG00000020807ENSMUST00000108505ENSMUST00000108506ENSMUST00000131546ENSMUST00000142530ENSMUSG00000040543ENSMUST00000075258ENSMUST00000108508ENSMUST00000132781ENSMUST00000142471
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055255 ENSDART00000077582 N/A N/A N/A 9.918±0.00 N/A N/A 0.186±0.06 0.432±0.21 0.082±0.00 N/A 0.657±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091622 ENST00000262483 N/A N/A 0.040±0.00 3.092±0.18 0.138±0.00 N/A 0.017±0.00 N/A N/A N/A N/A 5.072±6.84 0.030±0.00 0.803±0.31
ENST00000421306 N/A 0.438±0.00 N/A 3.659±0.00 0.303±0.00 0.261±0.00 0.071±0.00 0.351±0.00 N/A N/A 0.023±0.00 1.240±0.00 0.145±0.00 N/A
ENST00000572795 N/A N/A N/A N/A 0.092±0.00 0.549±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000129195 ENST00000250056 N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A N/A N/A N/A 2.885±0.00 0.220±0.05 N/A
ENST00000570337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.704±0.00 N/A N/A
ENST00000572595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573385 N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000573557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A
ENSG00000129235 ENST00000250101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.471±0.00 N/A N/A
ENST00000570330 9.577±0.00 14.351±0.00 N/A N/A 14.499±0.00 12.372±0.00 N/A 21.739±0.00 39.620±0.00 N/A 4.639±0.00 27.078±1.11 24.764±4.52 29.971±0.00
ENST00000571029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571957 9.887±0.00 19.010±0.00 N/A N/A 16.240±0.00 20.353±0.00 15.492±0.00 28.165±8.02 48.624±0.00 N/A 15.671±0.00 30.208±0.00 39.272±2.35 N/A
ENST00000573792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.534±0.00 N/A N/A
ENST00000574838 N/A N/A N/A 6.412±0.00 N/A N/A N/A N/A N/A N/A 3.291±0.00 N/A N/A N/A
ENST00000576020 N/A N/A N/A N/A N/A N/A 11.738±0.00 N/A N/A N/A N/A N/A 20.466±0.00 N/A
ENST00000577146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198920 ENST00000361413 N/A N/A N/A 1.664±0.00 1.515±0.00 1.068±0.00 N/A 1.478±0.00 0.872±0.00 1.951±0.07 N/A 3.043±0.94 1.293±0.19 4.592±0.32
ENST00000542826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570790 N/A N/A N/A N/A N/A 1.569±0.00 0.460±0.00 N/A 1.773±0.00 2.149±0.00 N/A N/A N/A N/A
ENST00000571642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.741±0.00 1.850±0.00 11.859±0.00
ENST00000573033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576823 N/A N/A 5.580±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274860 ENST00000612122 N/A 1.015±0.00 N/A 0.536±0.00 1.210±0.00 0.130±0.00 0.847±0.00 0.284±0.00 N/A N/A N/A N/A 0.553±0.00 0.676±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020807 ENSMUST00000108505 N/A 2.627±0.71 N/A N/A 1.802±0.07 1.390±0.14 0.561±0.00 0.842±0.00 N/A 2.207±0.35 N/A 3.650±1.22 N/A N/A
ENSMUST00000108506 0.779±0.14 N/A 0.786±0.00 4.191±1.52 N/A N/A N/A N/A 0.377±0.17 0.475±0.06 0.104±0.02 1.438±0.72 0.674±0.22 N/A
ENSMUST00000131546 1.217±0.04 0.869±0.20 1.210±0.00 2.387±0.67 1.241±0.00 0.699±0.24 0.237±0.06 0.652±0.30 0.370±0.20 N/A 0.160±0.00 2.378±0.81 0.767±0.34 4.469±0.45
ENSMUST00000142530 1.593±0.85 0.763±0.00 3.074±0.02 4.995±0.67 0.578±0.23 1.088±0.62 0.405±0.00 2.017±0.71 0.657±0.25 1.349±0.91 0.162±0.01 1.976±1.24 1.474±0.00 2.786±0.94
ENSMUST00000144553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040543 ENSMUST00000075258 1.435±0.15 2.515±0.11 2.077±0.38 3.727±2.13 1.270±0.62 5.060±1.46 0.931±0.23 1.307±0.41 N/A 9.219±1.21 0.622±0.22 3.317±1.48 0.037±0.04 0.714±0.34
ENSMUST00000108508 N/A 1.079±0.53 0.440±0.00 0.560±0.00 1.752±0.04 N/A N/A 0.520±0.00 0.026±0.01 1.971±0.26 0.460±0.00 2.839±1.07 0.045±0.05 N/A
ENSMUST00000132781 N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A
ENSMUST00000134210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142471 N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A 0.021±0.00

Loading