C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin 62kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422090 NUP62-004 ENSG00000213024 9606 - 19:49906825-49929744 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000422090
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000422090 10.863±0.00 9.738±0.00 1.025±0.00 4.365±3.55 5.101±3.08 4.190±1.65 3.111±2.23 8.013±0.00 1.946±0.00 5.949±5.03 6.843±6.39 14.744±8.09 15.293±3.96 20.549±2.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0003682 NAS chromatin binding
GO:0005487 NAS nucleocytoplasmic transporter activity
GO:0005515 IPI protein binding
GO:0005635 IDA nuclear envelope
GO:0005643 ISS nuclear pore
GO:0005737 NAS cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005975 TAS carbohydrate metabolic process
GO:0006351 ISS transcription, DNA-templated
GO:0006913 NAS nucleocytoplasmic transport
GO:0007077 TAS mitotic nuclear envelope disassembly
GO:0007166 ISS cell surface receptor signaling pathway
GO:0008219 ISS cell death
GO:0008285 ISS negative regulation of cell proliferation
GO:0008645 TAS hexose transport
GO:0009755 NAS hormone-mediated signaling pathway
GO:0009966 NAS regulation of signal transduction
GO:0010827 TAS regulation of glucose transport
GO:0015031 IEA protein transport
GO:0015758 TAS glucose transport
GO:0016032 TAS viral process
GO:0017056 IEA structural constituent of nuclear pore
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0030159 ISS receptor signaling complex scaffold activity
GO:0030529 IDA ribonucleoprotein complex
GO:0031074 NAS nucleocytoplasmic shuttling complex
GO:0031965 IDA nuclear membrane
GO:0042169 ISS SH2 domain binding
GO:0043066 ISS negative regulation of apoptotic process
GO:0043069 ISS negative regulation of programmed cell death
GO:0043123 ISS positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 ISS ubiquitin binding
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044281 TAS small molecule metabolic process
GO:0045742 NAS positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046578 NAS regulation of Ras protein signal transduction
GO:0046930 NAS pore complex
GO:0046966 ISS thyroid hormone receptor binding
GO:0051028 IEA mRNA transport
GO:0055085 TAS transmembrane transport

Homologs

No Homologs available.

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