C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: parvin, gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422871 PARVG-202 ENSG00000138964 9606 + 22:44172956-44208468 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartMuscleOvaryTestisENST00000422871
Transcript ID Adipose Brain Breast Heart Muscle Ovary Testis
ENST00000422871 0.603±0.00 0.641±0.00 0.436±0.00 0.184±0.00 0.055±0.00 0.600±0.00 0.310±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HG CIL_0008HG_0001 VISTA 22:43702370-44303917
CIL_0000V6 CIL_0000V6_0002 CGP 22:43999211-44219533
CIL_0000V5 CIL_0000V5_0002 CGP 22:44172956-44312851

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 TAS actin binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 TAS cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007160 TAS cell-matrix adhesion
GO:0030054 IEA cell junction
GO:0031532 IEA actin cytoskeleton reorganization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163667 Parvg-201 protein_coding Mus_musculus 0 889
ENSMUST00000023074 Parvg-001 protein_coding Mus_musculus 0 889

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