C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000V6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019117-ENSDARG00000067711 CGP 7955 25:5369942-5419138
GeneTranscriptPositionBiotype
ENSDARG00000019117 (parvb)
parvin, beta 		ENSDART00000011751 (parvb-001) 5369942-5398122 protein_coding
ENSDART00000153980 (parvb-003) 5379379-5392814 protein_coding
ENSDART00000154700 (parvb-002) 5373649-5389239 protein_coding
ENSDARG00000067711 (parvg)
parvin, gamma 		ENSDART00000097522 (parvg-001) 5403041-5419138 protein_coding
CIL_0000V6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188677-ENSG00000138964 CGP 9606 22:43999211-44219533
GeneTranscriptPositionBiotype
ENSG00000100347 (SAMM50)
SAMM50 sorting and assembly machinery component 		ENST00000350028 (SAMM50-001) 43955421-43996533 protein_coding
ENST00000465768 (SAMM50-006) 43990328-44010531 processed_transcript
ENST00000474323 (SAMM50-002) 43974595-43996529 retained_intron
ENST00000493161 (SAMM50-004) 43955442-43973322 processed_transcript
ENST00000493621 (SAMM50-005) 43995391-43996376 processed_transcript
ENST00000494795 (SAMM50-003) 43986344-43996529 retained_intron
ENSG00000138964 (PARVG)
parvin, gamma 		ENST00000356909 (PARVG-004) 44181400-44206635 nonsense_mediated_decay
ENST00000415224 (PARVG-201) 44181739-44198717 protein_coding
ENST00000416291 (PARVG-008) 44181022-44183408 protein_coding
ENST00000417767 (PARVG-010) 44181398-44183419 protein_coding
ENST00000422871 (PARVG-202) 44172956-44208468 protein_coding
ENST00000444313 (PARVG-001) 44180890-44208469 protein_coding
ENST00000453888 (PARVG-013) 44172984-44187172 processed_transcript
ENST00000466375 (PARVG-011) 44181861-44184261 protein_coding
ENST00000468564 (PARVG-007) 44185526-44207155 retained_intron
ENST00000471836 (PARVG-012) 44181750-44186114 retained_intron
ENST00000472551 (PARVG-005) 44196098-44219533 processed_transcript
ENST00000475485 (PARVG-006) 44181336-44206622 retained_intron
ENSG00000188677 (PARVB)
parvin, beta 		ENST00000338758 (PARVB-002) 44024277-44172949 protein_coding
ENST00000402876 (PARVB-006) 44024302-44119934 processed_transcript
ENST00000404989 (PARVB-003) 44069061-44169184 protein_coding
ENST00000406477 (PARVB-001) 43999211-44168923 protein_coding
ENST00000444029 (PARVB-004) 44031365-44132965 protein_coding
ENST00000477438 (PARVB-009) 44168179-44168927 processed_transcript
ENST00000477795 (PARVB-005) 44086684-44100089 processed_transcript
ENST00000484345 (PARVB-008) 44162734-44168243 processed_transcript
ENST00000495824 (PARVB-007) 44136464-44139124 processed_transcript
ENST00000619710 (PARVB-201) 44026304-44169221 protein_coding
ENSG00000279175 (CTA-414D7.1)
 ENST00000623440 (CTA-414D7.1-001) 44102779-44116232 sense_intronic
ENSG00000279933 (RP4-671O14.5)
 ENST00000623969 (RP4-671O14.5-001) 44183031-44187739 TEC
ENSG00000280011 (RP4-671O14.7)
 ENST00000624215 (RP4-671O14.7-001) 44210442-44229512 antisense
ENSG00000280434 (RP4-671O14.6)
 ENST00000624919 (RP4-671O14.6-001) 44139365-44153626 sense_overlapping
CIL_0000V6_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022438-ENSMUSG00000022439 CGP 10090 15:84232043-84342978
GeneTranscriptPositionBiotype
ENSMUSG00000022438 (Parvb)
parvin, beta 		ENSMUST00000023072 (Parvb-001) 84232043-84315688 protein_coding
ENSMUST00000122818 (Parvb-003) 84232066-84271318 nonsense_mediated_decay
ENSMUST00000131158 (Parvb-002) 84271291-84273906 retained_intron
ENSMUST00000146020 (Parvb-004) 84257140-84290434 processed_transcript
ENSMUSG00000022439 (Parvg)
parvin, gamma 		ENSMUST00000023074 (Parvg-001) 84324720-84342942 protein_coding
ENSMUST00000125928 (Parvg-003) 84326119-84328926 protein_coding
ENSMUST00000127551 (Parvg-002) 84324026-84327050 processed_transcript
ENSMUST00000139235 (Parvg-004) 84324734-84328890 nonsense_mediated_decay
ENSMUST00000145809 (Parvg-006) 84324795-84330095 processed_transcript
ENSMUST00000151072 (Parvg-005) 84324762-84328876 nonsense_mediated_decay
ENSMUST00000163667 (Parvg-201) 84326119-84342978 protein_coding
ENSMUSG00000089267 (Gm22890)
predicted gene, 22890 		ENSMUST00000158642 (Gm22890-201) 84323209-84323352 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000V6_0001ENSDARG00000019117ENSDART00000011751ENSDART00000153980ENSDART00000154700ENSDARG00000067711ENSDART00000097522CIL_0000V6_0002ENSG00000100347ENST00000350028ENST00000465768ENST00000474323ENST00000493161ENST00000493621ENST00000494795ENSG00000138964ENST00000356909ENST00000415224ENST00000416291ENST00000417767ENST00000422871ENST00000444313ENST00000453888ENST00000466375ENST00000468564ENST00000471836ENST00000472551ENST00000475485ENSG00000188677ENST00000338758ENST00000402876ENST00000404989ENST00000406477ENST00000444029ENST00000477438ENST00000477795ENST00000484345ENST00000495824ENST00000619710ENSG00000279175ENST00000623440ENSG00000279933ENST00000623969ENSG00000280011ENST00000624215ENSG00000280434ENST00000624919CIL_0000V6_0003ENSMUSG00000022438ENSMUST00000023072ENSMUST00000122818ENSMUST00000131158ENSMUST00000146020ENSMUSG00000022439ENSMUST00000023074ENSMUST00000125928ENSMUST00000127551ENSMUST00000139235ENSMUST00000145809ENSMUST00000151072ENSMUST00000163667ENSMUSG00000089267ENSMUST00000158642
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000V6_0001ENSDARG00000019117ENSDART00000011751ENSDARG00000067711ENSDART00000097522CIL_0000V6_0002ENSG00000100347ENST00000350028ENST00000494795ENSG00000138964ENST00000356909ENST00000415224ENST00000422871ENST00000444313ENST00000468564ENST00000475485ENSG00000188677ENST00000338758ENST00000402876ENST00000404989ENST00000406477ENST00000619710ENSG00000279175ENST00000623440ENSG00000279933ENST00000623969ENSG00000280011ENST00000624215ENSG00000280434ENST00000624919CIL_0000V6_0003ENSMUSG00000022438ENSMUST00000023072ENSMUST00000146020ENSMUSG00000022439ENSMUST00000023074ENSMUST00000127551ENSMUST00000145809ENSMUST00000163667ENSMUSG00000089267ENSMUST00000158642
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019117 ENSDART00000011751 N/A N/A N/A 7.974±3.03 N/A N/A 111.162±29.85 1.900±1.33 0.135±0.00 N/A 2.418±0.00 N/A N/A N/A
ENSDART00000153980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000154700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000067711 ENSDART00000097522 N/A N/A N/A 1.090±1.06 N/A N/A 4.667±4.14 32.200±0.00 0.136±0.00 N/A 3.712±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100347 ENST00000350028 49.819±0.00 26.449±0.00 6.735±0.00 16.758±7.36 28.650±25.08 16.485±5.91 17.879±11.24 15.180±8.89 12.638±5.86 7.021±2.04 31.697±12.77 24.047±9.51 17.847±1.01 28.397±4.04
ENST00000465768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494795 N/A N/A N/A N/A 0.501±0.00 N/A N/A N/A N/A N/A N/A 1.077±0.00 N/A N/A
ENSG00000138964 ENST00000356909 3.625±0.00 30.347±0.00 0.271±0.00 1.590±0.00 1.545±0.84 0.857±0.05 1.602±0.00 2.372±0.00 2.175±0.00 5.657±3.53 0.381±0.00 2.229±0.80 4.534±2.04 1.226±0.31
ENST00000415224 N/A N/A N/A N/A N/A N/A N/A 1.007±0.00 0.427±0.00 N/A N/A N/A N/A N/A
ENST00000416291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422871 0.603±0.00 N/A N/A 0.641±0.00 0.436±0.00 N/A 0.184±0.00 N/A N/A N/A 0.055±0.00 0.600±0.00 N/A 0.310±0.00
ENST00000444313 N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A 0.246±0.00 1.378±0.05 N/A 0.568±0.00 1.651±0.00 0.766±0.00
ENST00000453888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468564 N/A N/A N/A 0.024±0.00 N/A N/A 0.034±0.00 N/A N/A N/A N/A 0.092±0.00 N/A N/A
ENST00000471836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475485 N/A N/A N/A N/A 0.274±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188677 ENST00000338758 4.224±0.00 5.411±0.00 0.240±0.00 3.072±1.45 3.410±0.00 1.699±1.54 7.240±6.07 N/A 0.589±0.13 1.572±0.00 23.967±0.00 2.755±1.36 1.892±0.56 1.640±0.86
ENST00000402876 N/A N/A 0.688±0.00 N/A 2.423±0.00 N/A N/A N/A N/A N/A 18.284±0.00 4.690±0.00 N/A N/A
ENST00000404989 25.208±0.00 27.840±0.00 0.688±0.00 5.402±2.68 11.119±9.96 9.466±8.48 25.997±0.00 10.565±0.00 2.874±0.20 10.819±9.15 29.623±23.38 18.814±12.82 22.385±4.39 6.562±1.08
ENST00000406477 N/A N/A N/A N/A N/A 0.714±0.00 N/A N/A 1.477±0.00 N/A N/A 1.342±0.00 N/A N/A
ENST00000444029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619710 N/A N/A N/A 1.574±0.00 2.374±0.00 N/A 4.655±0.00 0.730±0.00 N/A 8.192±0.00 16.144±0.00 3.017±0.00 N/A 3.605±0.00
ENSG00000279175 ENST00000623440 0.089±0.00 0.264±0.00 0.059±0.00 0.072±0.06 0.112±0.01 0.086±0.02 0.076±0.01 0.052±0.04 0.067±0.03 0.127±0.05 0.043±0.00 0.075±0.05 0.015±0.01 0.117±0.02
ENSG00000279933 ENST00000623969 N/A 4.943±0.00 0.104±0.00 0.051±0.00 0.296±0.03 0.156±0.00 0.232±0.00 0.251±0.00 0.204±0.07 0.955±0.00 0.041±0.00 0.228±0.11 N/A 0.167±0.04
ENSG00000280011 ENST00000624215 0.063±0.00 N/A 0.026±0.00 0.066±0.06 0.100±0.00 0.030±0.01 0.015±0.01 0.075±0.00 0.073±0.00 N/A 0.030±0.00 0.036±0.01 N/A 0.072±0.03
ENSG00000280434 ENST00000624919 N/A N/A 0.037±0.00 N/A 0.175±0.00 0.100±0.00 N/A 0.204±0.00 0.118±0.03 0.195±0.00 N/A 0.185±0.00 N/A 0.240±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022438 ENSMUST00000023072 5.801±1.17 3.095±1.15 2.953±0.22 4.082±1.24 2.255±0.90 1.396±0.78 12.394±0.78 1.636±0.43 6.456±5.84 17.670±0.60 15.943±0.95 3.525±1.63 11.629±6.48 1.528±0.73
ENSMUST00000122818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146020 N/A N/A N/A 7.634±0.00 N/A N/A N/A N/A N/A N/A N/A 35.905±0.00 61.043±0.00 2.531±0.00
ENSMUSG00000022439 ENSMUST00000023074 1.107±0.67 1.261±0.21 0.874±0.07 0.934±0.64 10.903±3.80 1.051±0.38 0.518±0.09 1.132±0.53 5.126±4.32 5.530±0.28 0.240±0.25 1.133±0.31 0.267±0.08 26.410±2.31
ENSMUST00000125928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.871±0.00 N/A
ENSMUST00000139235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.225±0.00 N/A N/A N/A
ENSMUST00000151072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163667 N/A N/A N/A N/A N/A 0.598±0.00 N/A N/A 0.306±0.21 N/A N/A N/A 0.059±0.00 N/A
ENSMUSG00000089267 ENSMUST00000158642 399.106±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 341.040±0.00 N/A N/A 7.243±0.00 N/A

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