C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 145
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424310 RNF145-002 ENSG00000145860 9606 - 5:159157409-159209551 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainLungPlacentaENST00000424310
Transcript ID Adipose Adrenal Brain Lung Placenta
ENST00000424310 1.705±0.00 10.599±0.00 5.135±0.00 17.268±0.00 7.390±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UN CIL_0007UN_0001 VISTA 5:158613954-159215603
CIL_00087L CIL_00087L_0001 VISTA 5:158759112-159360490
CIL_0008X2 CIL_0008X2_0001 VISTA 5:158781834-159383129
CIL_0008O4 CIL_0008O4_0001 VISTA 5:158790777-159391906

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019333 Rnf145-006 protein_coding Mus_musculus 0 3116
ENSMUST00000101327 Rnf145-001 protein_coding Mus_musculus 0 924
ENSMUST00000124959 Rnf145-003 processed_transcript Mus_musculus 0 667

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