C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, DHHC-type containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424952 ZDHHC3-002 ENSG00000163812 9606 - 3:44925171-44976177 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000424952
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000424952 18.655±0.00 13.682±0.00 1.674±0.00 5.774±2.93 18.235±11.20 10.104±2.46 8.916±7.56 10.172±6.45 4.937±1.71 6.507±2.00 5.860±3.82 11.160±4.17 16.783±1.10 17.745±3.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000130 CIL_000130_0001 CGP 3:44874608-44976185
CIL_00073X CIL_00073X_0001 CGP 3:44915257-45036066

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016409 IDA palmitoyltransferase activity
GO:0018345 IDA protein palmitoylation
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000147563 Zdhhc3-003 protein_coding Mus_musculus 0 1628
ENSMUST00000140497 Zdhhc3-001 nonsense_mediated_decay Mus_musculus 0 1162
ENSMUST00000026892 Zdhhc3-008 nonsense_mediated_decay Mus_musculus 0 1114
ENSMUST00000138622 Zdhhc3-004 nonsense_mediated_decay Mus_musculus 0 968
ENSMUST00000155778 Zdhhc3-005 nonsense_mediated_decay Mus_musculus 0 933
ENSMUST00000129151 Zdhhc3-002 retained_intron Mus_musculus 0 835
ENSMUST00000129862 Zdhhc3-010 nonsense_mediated_decay Mus_musculus 0 695
ENSMUST00000123937 Zdhhc3-011 nonsense_mediated_decay Mus_musculus 0 518
ENSMUST00000152396 Zdhhc3-009 nonsense_mediated_decay Mus_musculus 0 514
ENSMUST00000150679 Zdhhc3-006 nonsense_mediated_decay Mus_musculus 0 501
ENSMUST00000130717 Zdhhc3-007 protein_coding Mus_musculus 0 396

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