C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor 98
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425867 GPR98-004 ENSG00000164199 9606 + 5:90781081-91164215 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENST00000425867
Transcript ID Brain Ovary Testis
ENST00000425867 1.253±0.00 0.222±0.00 0.921±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037K CIL_00037K_0002 CGP 5:90471748-90529584
CIL_0005KB CIL_0005KB_0002 CGP 5:90515611-91164221
CIL_0005KI CIL_0005KI_0002 CGP 5:90529344-91383359

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 NAS:IEA G-protein coupled receptor activity
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0007154 IEA cell communication
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 TAS:IEA G-protein coupled receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0007399 NAS nervous system development
GO:0007605 IMP sensory perception of sound
GO:0009986 IDA cell surface
GO:0016020 NAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016337 NAS single organismal cell-cell adhesion
GO:0043235 IDA receptor complex
GO:0045494 IMP photoreceptor cell maintenance
GO:0048496 IMP maintenance of organ identity
GO:0050877 IMP neurological system process
GO:0050953 IMP sensory perception of light stimulus
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095585 Gpr98-001 protein_coding Mus_musculus 0 5125
ENSMUST00000125698 Gpr98-009 nonsense_mediated_decay Mus_musculus 0 3965
ENSMUST00000128120 Gpr98-010 protein_coding Mus_musculus 0 1232
ENSMUST00000156631 Gpr98-011 processed_transcript Mus_musculus 0 870

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