C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: capping protein (actin filament) muscle Z-line, alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426421 CAPZA2-013 ENSG00000198898 9606 + 7:116862600-116918188 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000426421
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000426421 17.021±0.00 3.747±0.00 16.310±1.93 15.054±0.00 13.938±8.75 14.731±2.73 9.713±0.00 14.474±0.00 13.684±0.00 9.832±0.00 53.395±41.53 51.181±0.00 18.576±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040Q CIL_00040Q_0001 CGP 7:116672390-116922049
CIL_0003QV CIL_0003QV_0001 CGP 7:116811070-117230103

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0008290 IEA F-actin capping protein complex
GO:0030036 IEA actin cytoskeleton organization
GO:0051016 IEA barbed-end actin filament capping
GO:0071203 IEA WASH complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130606 Capza2-007 nonsense_mediated_decay Mus_musculus 0 1524
ENSMUST00000015877 Capza2-001 protein_coding Mus_musculus 0 1408
ENSMUST00000142592 Capza2-004 retained_intron Mus_musculus 0 787
ENSMUST00000156701 Capza2-002 retained_intron Mus_musculus 0 627
ENSMUST00000152005 Capza2-006 processed_transcript Mus_musculus 0 616
ENSMUST00000148694 Capza2-003 processed_transcript Mus_musculus 0 551
ENSMUST00000136771 Capza2-005 processed_transcript Mus_musculus 0.000000000000008 86

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