C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427214 DDX39B-017 ENSG00000198563 9606 - 6:31532780-31541531 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartKidneyLiverLungOvaryENST00000427214
Transcript ID Bladder Heart Kidney Liver Lung Ovary
ENST00000427214 8.915±0.00 9.094±0.00 5.614±0.00 15.323±0.00 14.583±0.00 12.184±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005524 IEA ATP binding
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172549 Ddx39b-004 protein_coding Mus_musculus 0 1284
ENSMUST00000173731 Ddx39b-006 protein_coding Mus_musculus 0 1284
ENSMUST00000068056 Ddx39b-001 protein_coding Mus_musculus 0 1284
ENSMUST00000174164 Ddx39b-005 retained_intron Mus_musculus 0 1079
ENSMUST00000174757 Ddx39b-002 protein_coding Mus_musculus 0 990

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