C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: inhibitor of growth family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427726 ING3-005 ENSG00000071243 9606 + 7:120950785-120975290 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000427726
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000427726 1.607±0.00 2.370±0.00 1.258±0.41 1.015±0.04 1.669±0.03 1.209±0.36 1.446±0.91 0.991±0.28 3.173±1.74 1.124±0.16 2.372±1.01 2.196±1.95 1.983±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SO CIL_0007SO_0001 VISTA 7:120596713-121200737
CIL_0004XL CIL_0004XL_0002 CGP 7:120787320-120977216
CIL_0005U9 CIL_0005U9_0002 CGP 7:120950749-121297444

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000812 IDA Swr1 complex
GO:0004402 IDA histone acetyltransferase activity
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0032777 IDA Piccolo NuA4 histone acetyltransferase complex
GO:0035064 IDA methylated histone binding
GO:0035267 IDA NuA4 histone acetyltransferase complex
GO:0040008 IEA regulation of growth
GO:0043065 IDA positive regulation of apoptotic process
GO:0043967 IDA histone H4 acetylation
GO:0043968 IDA histone H2A acetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152877 Ing3-004 nonsense_mediated_decay Mus_musculus 0 1906
ENSMUST00000031680 Ing3-001 protein_coding Mus_musculus 0 1419
ENSMUST00000136200 Ing3-003 nonsense_mediated_decay Mus_musculus 0 1402
ENSMUST00000115389 Ing3-005 protein_coding Mus_musculus 0 1271
ENSMUST00000144534 Ing3-002 retained_intron Mus_musculus 0 1075
ENSMUST00000146684 Ing3-007 processed_transcript Mus_musculus 0 614
ENSMUST00000151473 Ing3-006 protein_coding Mus_musculus 0 516
ENSMUST00000136161 Ing3-009 processed_transcript Mus_musculus 0 481
ENSMUST00000149728 Ing3-008 processed_transcript Mus_musculus 0 355
ENSMUST00000141689 Ing3-010 retained_intron Mus_musculus 0 252

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