C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box J2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428177 FOXJ2-002 ENSG00000065970 9606 + 12:8033360-8050222 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001D CIL_00001D_0001 CGP 12:7919230-8055503
CIL_00001E CIL_00001E_0001 CGP 12:8032703-8066471

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IDA:IEA sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003238 Foxj2-001 protein_coding Mus_musculus 0 2172
ENSMUST00000177927 Foxj2-201 protein_coding Mus_musculus 0 1982
ENSMUST00000022142 Naip1-201 protein_coding Mus_musculus 0.00005 55

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