C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box J2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003238 Foxj2-001 ENSMUSG00000003154 10090 + 6:122819914-122845366 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003238
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003238 3.811±1.33 5.978±0.36 2.744±1.07 1.956±0.64 5.176±2.73 5.532±1.04 2.488±0.29 2.139±0.16 0.751±0.23 6.618±1.41 4.694±0.56 4.294±1.45 2.618±1.99 0.677±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001D CIL_00001D_0002 CGP 6:122727809-122845366
CIL_00001E CIL_00001E_0002 CGP 6:122819914-122856161

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000162391 FOXJ2-001 protein_coding Homo_sapiens 0 2719
ENST00000428177 FOXJ2-002 protein_coding Homo_sapiens 0 2172
ENST00000539192 FOXJ2-003 processed_transcript Homo_sapiens 0 361

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