C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00001E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000065970-ENSG00000171860 CGP 9606 12:8032703-8066471
GeneTranscriptPositionBiotype
ENSG00000065970 (FOXJ2)
forkhead box J2 		ENST00000162391 (FOXJ2-001) 8032703-8055503 protein_coding
ENST00000428177 (FOXJ2-002) 8033360-8050222 protein_coding
ENST00000539192 (FOXJ2-003) 8049968-8053013 processed_transcript
ENSG00000171860 (C3AR1)
complement component 3a receptor 1 		ENST00000307637 (C3AR1-001) 8058302-8066471 protein_coding
ENST00000546241 (C3AR1-002) 8059746-8066337 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_00001E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003154-ENSMUSG00000040552 CGP 10090 6:122819914-122856161
GeneTranscriptPositionBiotype
ENSMUSG00000003154 (Foxj2)
forkhead box J2 		ENSMUST00000003238 (Foxj2-001) 122819914-122845366 protein_coding
ENSMUST00000177927 (Foxj2-201) 122820511-122845341 protein_coding
ENSMUSG00000040552 (C3ar1)
complement component 3a receptor 1 		ENSMUST00000042081 (C3ar1-001) 122847138-122856161 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001E_0001ENSG00000065970ENST00000162391ENST00000428177ENST00000539192ENSG00000171860ENST00000307637ENST00000546241CIL_00001E_0002ENSMUSG00000003154ENSMUST00000003238ENSMUST00000177927ENSMUSG00000040552ENSMUST00000042081
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001E_0001ENSG00000065970ENST00000162391ENSG00000171860ENST00000307637ENST00000546241CIL_00001E_0002ENSMUSG00000003154ENSMUST00000003238ENSMUST00000177927ENSMUSG00000040552ENSMUST00000042081
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065970 ENST00000162391 8.874±0.00 2.278±0.00 1.136±0.00 2.161±0.56 4.456±2.37 4.383±3.52 4.302±3.25 2.241±1.62 1.856±0.64 4.346±3.38 6.414±3.44 6.445±4.45 6.094±0.49 6.587±2.73
ENST00000428177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171860 ENST00000307637 6.242±0.00 4.193±0.00 0.159±0.00 1.465±0.69 3.306±0.78 1.371±0.00 1.735±1.34 2.550±2.19 2.085±0.13 4.567±3.21 0.621±0.00 2.257±1.10 16.447±7.16 1.587±1.08
ENST00000546241 N/A N/A N/A N/A N/A N/A 0.406±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003154 ENSMUST00000003238 3.811±1.33 5.978±0.36 2.744±1.07 1.956±0.64 5.176±2.73 5.532±1.04 2.488±0.29 2.139±0.16 0.751±0.23 6.618±1.41 4.694±0.56 4.294±1.45 2.618±1.99 0.677±0.11
ENSMUST00000177927 1.272±0.45 0.928±0.00 2.235±0.43 0.603±0.00 2.402±1.01 1.958±0.86 3.224±0.55 2.402±0.53 0.630±0.33 3.166±0.12 3.646±0.58 3.866±2.89 2.895±2.84 0.473±0.26
ENSMUSG00000040552 ENSMUST00000042081 7.554±2.14 3.755±0.49 1.680±0.25 0.309±0.17 6.625±1.24 1.979±0.23 1.651±0.20 0.987±0.09 0.686±0.22 2.246±0.26 0.117±0.03 4.761±2.05 0.694±0.62 0.304±0.15

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