C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000433888  |
PTPN4-005 |
ENSG00000088179 |
9606 | + |
2:119877323-119934960  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00093M | CIL_00093M_0001 | VISTA | 2:119187057-119791464 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005737 | IEA | cytoplasm |
| GO:0005856 | IEA | cytoskeleton |
| GO:0008092 | IEA | cytoskeletal protein binding |
| GO:0019898 | IEA | extrinsic component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000163435
|
Ptpn4-002 | protein_coding | Mus_musculus | 0 | 532 |
|
ENSMUST00000064091
|
Ptpn4-001 | protein_coding | Mus_musculus | 0 | 532 |
|
ENSMUST00000163179
|
Ptpn4-010 | nonsense_mediated_decay | Mus_musculus | 0 | 453 |
|
ENSMUST00000168808
|
Ptpn4-007 | retained_intron | Mus_musculus | 0 | 339 |
|
ENSMUST00000168429
|
Ptpn4-009 | protein_coding | Mus_musculus | 0 | 268 |
|
ENSMUST00000164086
|
Ptpn4-011 | protein_coding | Mus_musculus | 0 | 207 |
|
ENSMUST00000168303
|
Ptpn4-004 | protein_coding | Mus_musculus | 0 | 204 |
|
ENSMUST00000166422
|
Ptpn4-005 | nonsense_mediated_decay | Mus_musculus | 2.99878e-43 | 180 |
|
ENSMUST00000164269
|
Ptpn4-008 | nonsense_mediated_decay | Mus_musculus | 5e-26 | 122 |
|
ENSMUST00000163621
|
Ptpn4-006 | protein_coding | Mus_musculus | 8e-24 | 115 |
