C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member 5C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435030 KIF5C-001 ENSG00000168280 9606 + 2:148875250-149026759 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000435030
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000435030 0.072±0.00 0.188±0.00 0.094±0.00 48.545±4.18 0.070±0.03 0.852±0.16 0.221±0.13 0.273±0.00 0.080±0.02 0.049±0.00 0.320±0.17 0.077±0.02 7.016±1.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ME CIL_0006ME_0001 CGP 2:148644440-149026759
CIL_0006MF CIL_0006MF_0001 CGP 2:148875250-149215262

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003777 IEA:TAS microtubule motor activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005871 IEA:IBA kinesin complex
GO:0005874 IEA microtubule
GO:0006200 IBA ATP catabolic process
GO:0006996 TAS organelle organization
GO:0007018 IEA:IBA microtubule-based movement
GO:0007411 IBA axon guidance
GO:0008017 IEA microtubule binding
GO:0008104 IBA protein localization
GO:0008152 IEA:IBA metabolic process
GO:0008574 IBA plus-end-directed microtubule motor activity
GO:0016887 IBA ATPase activity
GO:0030705 IBA cytoskeleton-dependent intracellular transport
GO:0051028 ISS mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028102 Kif5c-001 protein_coding Mus_musculus 0 4342
ENSMUST00000138834 Kif5c-003 processed_transcript Mus_musculus 0 889
ENSMUST00000146247 Kif5c-002 protein_coding Mus_musculus 0 749
ENSDART00000138947 kif5ba-001 protein_coding Danio_rerio 0 588
ENSDART00000113849 kif5ba-201 protein_coding Danio_rerio 0 584
ENSDART00000083567 kif5c-001 protein_coding Danio_rerio 0 448

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