C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006MF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168280-ENSG00000150556 CGP 9606 2:148875250-149215262
GeneTranscriptPositionBiotype
ENSG00000150556 (LYPD6B)
LY6/PLAUR domain containing 6B 		ENST00000280115 (LYPD6B-201) 149204525-149215258 protein_coding
ENST00000409029 (LYPD6B-003) 149077522-149215262 protein_coding
ENST00000409642 (LYPD6B-001) 149038467-149215262 protein_coding
ENST00000409876 (LYPD6B-002) 149038718-149215256 protein_coding
ENST00000437627 (LYPD6B-005) 149118181-149200708 nonsense_mediated_decay
ENST00000442722 (LYPD6B-006) 149119103-149208367 nonsense_mediated_decay
ENST00000450639 (LYPD6B-008) 149118196-149187635 protein_coding
ENST00000473800 (LYPD6B-007) 149038107-149101583 processed_transcript
ENST00000473975 (LYPD6B-010) 149118174-149205322 processed_transcript
ENST00000480545 (LYPD6B-004) 149118174-149131588 processed_transcript
ENST00000498249 (LYPD6B-009) 149142036-149215262 processed_transcript
ENSG00000168280 (KIF5C)
kinesin family member 5C 		ENST00000435030 (KIF5C-001) 148875250-149026759 protein_coding
ENST00000450621 (KIF5C-005) 148947297-148962079 protein_coding
ENST00000460377 (KIF5C-002) 148978930-148998836 retained_intron
ENST00000464066 (KIF5C-003) 148947900-149023510 processed_transcript
ENST00000482151 (KIF5C-004) 148999935-149026759 retained_intron
ENSG00000228236 (TXNP5)
thioredoxin pseudogene 5 		ENST00000441043 (TXNP5-001) 149068596-149068910 processed_pseudogene
ENSG00000231079 (AC105402.4)
 ENST00000446781 (AC105402.4-001) 148877875-148888823 antisense
ENST00000601658 (AC105402.4-002) 148866470-148888782 antisense
ENST00000608822 (AC105402.4-004) 148883523-148885577 antisense
ENST00000609886 (AC105402.4-003) 148885840-148888443 antisense
CIL_0006MF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026764-ENSMUSG00000026765 CGP 10090 2:49619298-49948849
GeneTranscriptPositionBiotype
ENSMUSG00000026764 (Kif5c)
kinesin family member 5C 		ENSMUST00000028102 (Kif5c-001) 49619298-49774778 protein_coding
ENSMUST00000127245 (Kif5c-005) 49744525-49757387 processed_transcript
ENSMUST00000132968 (Kif5c-006) 49752190-49758908 processed_transcript
ENSMUST00000138834 (Kif5c-003) 49722567-49735584 processed_transcript
ENSMUST00000146247 (Kif5c-002) 49700579-49730251 protein_coding
ENSMUST00000152353 (Kif5c-004) 49732611-49735575 processed_transcript
ENSMUSG00000026765 (Lypd6b)
LY6/PLAUR domain containing 6B 		ENSMUST00000028103 (Lypd6b-001) 49787688-49948849 protein_coding
ENSMUST00000129867 (Lypd6b-003) 49840090-49942537 processed_transcript
ENSMUST00000153422 (Lypd6b-002) 49787731-49930984 processed_transcript
ENSMUSG00000082879 (Gm13525)
predicted gene 13525 		ENSMUST00000120607 (Gm13525-001) 49680499-49680976 processed_pseudogene
ENSMUSG00000085357 (Gm13480)
predicted gene 13480 		ENSMUST00000125095 (Gm13480-001) 49805976-49812948 lincRNA
ENSMUSG00000088825 (Gm25223)
predicted gene, 25223 		ENSMUST00000158200 (Gm25223-201) 49906771-49906880 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006MF_0001ENSG00000150556ENST00000280115ENST00000409029ENST00000409642ENST00000409876ENST00000437627ENST00000442722ENST00000450639ENST00000473800ENST00000473975ENST00000480545ENST00000498249ENSG00000168280ENST00000435030ENST00000450621ENST00000460377ENST00000464066ENST00000482151ENSG00000228236ENST00000441043ENSG00000231079ENST00000446781ENST00000601658ENST00000608822ENST00000609886CIL_0006MF_0002ENSMUSG00000026764ENSMUST00000028102ENSMUST00000127245ENSMUST00000132968ENSMUST00000138834ENSMUST00000146247ENSMUST00000152353ENSMUSG00000026765ENSMUST00000028103ENSMUST00000129867ENSMUST00000153422ENSMUSG00000082879ENSMUST00000120607ENSMUSG00000085357ENSMUST00000125095ENSMUSG00000088825ENSMUST00000158200
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006MF_0001ENSG00000150556ENST00000280115ENST00000409029ENST00000409642ENST00000409876ENST00000437627ENST00000450639ENST00000473800ENST00000480545ENST00000498249ENSG00000168280ENST00000435030ENST00000450621ENST00000460377ENST00000464066ENST00000482151ENSG00000228236ENST00000441043ENSG00000231079ENST00000446781ENST00000601658ENST00000608822ENST00000609886CIL_0006MF_0002ENSMUSG00000026764ENSMUST00000028102ENSMUST00000132968ENSMUST00000138834ENSMUST00000146247ENSMUSG00000026765ENSMUST00000028103ENSMUST00000129867ENSMUST00000153422ENSMUSG00000082879ENSMUST00000120607ENSMUSG00000085357ENSMUST00000125095ENSMUSG00000088825ENSMUST00000158200
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150556 ENST00000280115 0.246±0.00 N/A N/A 0.306±0.23 0.368±0.00 0.038±0.00 0.036±0.00 1.106±1.05 0.188±0.00 0.593±0.00 N/A 6.416±6.52 1.397±0.05 7.522±4.65
ENST00000409029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 N/A
ENST00000409642 N/A 0.080±0.00 N/A 0.177±0.00 N/A N/A N/A 1.418±0.00 N/A N/A N/A 5.257±0.00 0.233±0.00 4.068±0.00
ENST00000409876 N/A N/A 0.409±0.00 0.453±0.00 0.333±0.00 N/A N/A 0.777±0.00 0.698±0.00 1.033±0.00 N/A 2.595±1.14 N/A 5.544±0.00
ENST00000437627 N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A
ENST00000442722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450639 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.095±0.00 N/A N/A N/A N/A
ENST00000473800 N/A N/A 0.821±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480545 N/A N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A
ENST00000498249 N/A 0.095±0.00 N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168280 ENST00000435030 0.072±0.00 0.188±0.00 0.094±0.00 48.545±4.18 0.070±0.03 0.852±0.16 0.221±0.13 0.273±0.00 N/A 0.080±0.02 0.049±0.00 0.320±0.17 0.077±0.02 7.016±1.24
ENST00000450621 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.394±0.00 N/A N/A 0.149±0.00 N/A
ENST00000460377 N/A 0.247±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A N/A
ENST00000464066 N/A N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A N/A 0.044±0.00 0.117±0.00 N/A 5.214±0.56
ENST00000482151 N/A 0.134±0.00 N/A N/A 0.082±0.00 N/A 0.049±0.00 0.318±0.00 0.187±0.13 0.134±0.04 0.038±0.00 0.446±0.00 0.040±0.01 N/A
ENSG00000228236 ENST00000441043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A 0.038±0.00
ENSG00000231079 ENST00000446781 N/A 0.004±0.00 0.032±0.00 0.146±0.09 N/A N/A 0.005±0.00 N/A 0.015±0.00 0.039±0.00 N/A 0.020±0.00 N/A N/A
ENST00000601658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.307±0.07
ENST00000608822 N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609886 N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.142±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026764 ENSMUST00000028102 0.598±0.58 0.773±0.12 0.292±0.00 53.774±6.51 0.920±0.40 0.706±0.08 0.085±0.04 0.177±0.09 0.022±0.02 0.096±0.02 0.027±0.01 1.206±0.32 0.932±0.34 1.374±0.00
ENSMUST00000127245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.987±0.98 N/A N/A
ENSMUST00000138834 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A N/A 43.512±0.00
ENSMUST00000146247 N/A N/A N/A 433.454±0.00 N/A N/A 0.358±0.00 N/A N/A N/A 0.112±0.00 4.363±0.00 6.308±0.00 43.287±0.00
ENSMUST00000152353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026765 ENSMUST00000028103 0.309±0.17 0.364±0.20 N/A 2.214±0.00 0.363±0.27 0.970±0.56 0.094±0.06 0.448±0.32 0.022±0.01 0.554±0.19 0.064±0.00 0.888±0.55 0.115±0.03 0.126±0.09
ENSMUST00000129867 N/A N/A N/A N/A 0.619±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00
ENSMUST00000153422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.280±0.08
ENSMUSG00000082879 ENSMUST00000120607 0.369±0.00 N/A N/A 0.398±0.12 N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.07 N/A
ENSMUSG00000085357 ENSMUST00000125095 0.031±0.00 N/A 0.048±0.03 0.028±0.00 N/A 0.075±0.01 N/A 0.053±0.02 0.010±0.00 0.037±0.00 N/A 0.034±0.00 N/A 0.033±0.00
ENSMUSG00000088825 ENSMUST00000158200 N/A N/A N/A 17.712±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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