C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | serologically defined colon cancer antigen 8 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000435549  |
SDCCAG8-002 |
ENSG00000054282 |
9606 | + |
1:243286383-243500091  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000L3 | CIL_0000L3_0002 | CGP | 1:243124428-243500092 |
| CIL_0006TO | CIL_0006TO_0001 | CGP | 1:243256034-243851079 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000086 | TAS | G2/M transition of mitotic cell cycle |
| GO:0000278 | TAS | mitotic cell cycle |
| GO:0005515 | IPI | protein binding |
| GO:0005813 | IDA | centrosome |
| GO:0005814 | IDA | centriole |
| GO:0005829 | TAS | cytosol |
| GO:0005911 | IDA | cell-cell junction |
| GO:0030010 | ISS | establishment of cell polarity |
| GO:0035148 | ISS | tube formation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000027785
|
Sdccag8-001 | protein_coding | Mus_musculus | 0 | 756 |
|
ENSMUST00000123409
|
Sdccag8-003 | nonsense_mediated_decay | Mus_musculus | 0 | 484 |
|
ENSMUST00000133305
|
Sdccag8-004 | retained_intron | Mus_musculus | 0 | 398 |
|
ENSMUST00000139589
|
Sdccag8-006 | processed_transcript | Mus_musculus | 0 | 333 |
|
ENSMUST00000056773
|
Sdccag8-005 | protein_coding | Mus_musculus | 0 | 272 |
|
ENSMUST00000150429
|
Sdccag8-002 | retained_intron | Mus_musculus | 3e-39 | 167 |
|
ENSMUST00000019843
|
Akt3-002 | protein_coding | Mus_musculus | 0.00000001 | 66 |
