C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L32
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435983 RPL32-004 ENSG00000144713 9606 - 3:12836050-12841545 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000435983
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000435983 526.267±0.00 743.825±0.00 22.375±0.00 214.129±98.96 343.559±195.88 362.654±247.09 101.726±47.72 196.694±87.43 165.577±4.74 289.636±205.20 328.597±206.99 871.190±635.72 1108.072±244.66 507.302±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SD CIL_0005SD_0001 CGP 3:12733525-12871916
CIL_00051A CIL_00051A_0001 CGP 3:12796472-12871916

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA:NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081840 Rpl32-001 protein_coding Mus_musculus 0 593
ENSMUST00000187999 RP24-292B21.3-001 processed_pseudogene Mus_musculus 0 453
ENSDART00000060005 rpl32-001 protein_coding Danio_rerio 0 327

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