C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436509 PSMC1P12-001 ENSG00000226126 9606 - 1:118614333-118615646 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverLungMusclePlacentaTestisENST00000436509
Transcript ID Brain Breast Kidney Liver Lung Muscle Placenta Testis
ENST00000436509 0.059±0.00 0.058±0.00 0.050±0.00 0.037±0.00 0.008±0.00 0.015±0.00 0.011±0.00 0.064±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T7 CIL_0008T7_0001 VISTA 1:118185403-118787332
CIL_0008CA CIL_0008CA_0001 VISTA 1:118609935-119210971

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021595 Psmc1-201 protein_coding Mus_musculus 0 1349
ENSMUST00000122140 Gm9575-001 processed_pseudogene Mus_musculus 0 680

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