C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 9 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436565 DHX9P1-001 ENSG00000228002 9606 + 13:76984868-76987943 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000436565
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000436565 0.011±0.00 0.011±0.00 0.043±0.04 0.007±0.00 0.007±0.00 0.007±0.00 0.060±0.00 0.003±0.00 0.006±0.00 0.012±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004A CIL_00004A_0001 CGP 13:76948497-77002517

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000186380 Dhx9-001 protein_coding Mus_musculus 0 3308
ENSMUST00000042141 Dhx9-201 protein_coding Mus_musculus 0 3295
ENSMUST00000186966 Dhx9-002 nonsense_mediated_decay Mus_musculus 0 2337
ENSMUST00000188345 Dhx9-003 protein_coding Mus_musculus 0 2252
ENSMUST00000190544 Dhx9-007 nonsense_mediated_decay Mus_musculus 0 1437
ENSMUST00000189516 Dhx9-008 retained_intron Mus_musculus 0 627
ENSMUST00000189509 Dhx9-005 retained_intron Mus_musculus 0 409
ENSMUST00000189425 Dhx9-004 retained_intron Mus_musculus 1e-36 159
ENSMUST00000190383 Dhx9-006 retained_intron Mus_musculus 0.000000000000002 90

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