C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042141 Dhx9-201 ENSMUSG00000042699 10090 - 1:153455758-153487660 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042141
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042141 9.261±2.72 2.937±0.73 18.555±2.31 37.845±15.35 6.232±0.72 6.717±1.55 6.373±1.16 11.878±1.66 22.338±21.86 10.725±2.73 5.787±0.45 10.526±7.84 25.937±7.76 13.605±5.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001085 IEA RNA polymerase II transcription factor binding
GO:0001649 IEA osteoblast differentiation
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005730 IDA nucleolus
GO:0005813 IEA centrosome
GO:0006200 IEA ATP catabolic process
GO:0007623 IMP circadian rhythm
GO:0008026 IEA ATP-dependent helicase activity
GO:0016020 IEA membrane
GO:0030529 ISO ribonucleoprotein complex
GO:0034605 IDA cellular response to heat
GO:0036464 IEA cytoplasmic ribonucleoprotein granule
GO:0044822 IEA poly(A) RNA binding
GO:0070934 IEA CRD-mediated mRNA stabilization
GO:0070937 IEA CRD-mediated mRNA stability complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367549 DHX9-001 protein_coding Homo_sapiens 0 4442
ENST00000436565 DHX9P1-001 processed_pseudogene Homo_sapiens 0 3295
ENST00000473076 DHX9-006 processed_transcript Homo_sapiens 0 527
ENST00000474446 DHX9-004 processed_transcript Homo_sapiens 0 935
ENST00000477802 DHX9-003 processed_transcript Homo_sapiens 0 337
ENST00000479271 DHX9-002 processed_transcript Homo_sapiens 0 202
ENST00000483416 DHX9-007 processed_transcript Homo_sapiens 0 701
ENST00000485081 DHX9-005 processed_transcript Homo_sapiens 0 1729
ENST00000490519 DHX9-008 processed_transcript Homo_sapiens 0 307
ENST00000532521 RP11-574M7.2-004 unprocessed_pseudogene Homo_sapiens 0 1035
ENST00000533748 RP11-482L11.1-001 processed_pseudogene Homo_sapiens 0 569

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