C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436802 RP5-1198O20.5-001 ENSG00000227163 9606 - 1:44087958-44088477 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000436802
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000436802 0.217±0.00 0.989±0.00 0.312±0.00 0.629±0.00 0.207±0.00 0.396±0.00 0.925±0.00 0.081±0.00 0.643±0.00 0.266±0.01 0.353±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B8 CIL_0009B8_0001 VISTA 1:43734711-44337665
CIL_0008SF CIL_0008SF_0001 VISTA 1:43949748-44550457

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178611 Atp5g1-201 protein_coding Mus_musculus 6.99949e-42 174
ENSMUST00000107684 Atp5g1-002 protein_coding Mus_musculus 6.99949e-42 174
ENSMUST00000107686 Atp5g1-003 protein_coding Mus_musculus 6.99949e-42 174
ENSMUST00000090541 Atp5g1-001 protein_coding Mus_musculus 6.99949e-42 174
ENSMUST00000081241 Gm10039-001 processed_pseudogene Mus_musculus 3e-40 169

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