C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: creatine kinase, mitochondrial 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437534 CKMT1B-002 ENSG00000237289 9606 + 15:43594027-43599406 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000437534
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000437534 4.609±1.10 0.307±0.15 1.543±1.11 0.041±0.00 1.287±0.00 0.006±0.00 0.032±0.00 1.061±1.20 0.607±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000680 CIL_000680_0001 CGP 15:43533462-43604901
CIL_0007WI CIL_0007WI_0001 VISTA 15:43579049-44181693
CIL_000683 CIL_000683_0001 CGP 15:43593054-43618800

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000317 Ckmt1-002 protein_coding Mus_musculus 0 1376
ENSMUST00000078222 Ckmt1-001 protein_coding Mus_musculus 0 1306
ENSMUST00000150271 Ckmt1-004 protein_coding Mus_musculus 0 1129
ENSMUST00000145380 Ckmt1-003 retained_intron Mus_musculus 0 747
ENSMUST00000125812 Ckmt1-010 protein_coding Mus_musculus 0 726
ENSMUST00000129130 Ckmt1-009 protein_coding Mus_musculus 0 593
ENSMUST00000125221 Ckmt1-007 protein_coding Mus_musculus 0 560
ENSMUST00000128612 Ckmt1-008 nonsense_mediated_decay Mus_musculus 0 466
ENSMUST00000126130 Ckmt1-005 nonsense_mediated_decay Mus_musculus 0 383
ENSMUST00000153040 Ckmt1-006 retained_intron Mus_musculus 0 366

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