C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon-induced protein 35
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438323 IFI35-001 ENSG00000068079 9606 + 17:43006740-43014456 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000438323
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000438323 9.600±0.00 7.877±0.00 4.624±0.00 9.153±0.00 7.561±0.00 3.566±2.20 9.429±5.45 4.172±3.74 2.301±0.37 2.500±0.00 12.625±5.97 16.305±4.95 4.611±3.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063T CIL_00063T_0001 CGP 17:43006725-43025123

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0060337 TAS type I interferon signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000010502 Ifi35-001 protein_coding Mus_musculus 0 579
ENSMUST00000131024 Ifi35-003 nonsense_mediated_decay Mus_musculus 0 276
ENSMUST00000125958 Ifi35-002 retained_intron Mus_musculus 0 211

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