C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00063T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000068079-ENSG00000108828 CGP 9606 17:43006725-43025123
GeneTranscriptPositionBiotype
ENSG00000068079 (IFI35)
interferon-induced protein 35 		ENST00000246911 (IFI35-007) 43006785-43013582 retained_intron
ENST00000396722 (IFI35-004) 43006808-43012612 retained_intron
ENST00000415816 (IFI35-002) 43006725-43014456 protein_coding
ENST00000438323 (IFI35-001) 43006740-43014456 protein_coding
ENST00000534876 (IFI35-006) 43013178-43013659 retained_intron
ENST00000536969 (IFI35-003) 43006788-43013044 processed_transcript
ENST00000538473 (IFI35-005) 43012061-43013364 retained_intron
ENST00000546325 (IFI35-008) 43012950-43013648 retained_intron
ENSG00000108828 (VAT1)
vesicle amine transport 1 		ENST00000355653 (VAT1-001) 43014605-43022418 protein_coding
ENST00000420567 (VAT1-002) 43015918-43020273 protein_coding
ENST00000587062 (VAT1-004) 43018749-43025122 protein_coding
ENST00000587147 (VAT1-008) 43016067-43018045 protein_coding
ENST00000587173 (VAT1-003) 43015899-43022356 protein_coding
ENST00000589709 (VAT1-006) 43017842-43019555 protein_coding
ENST00000589828 (VAT1-007) 43018122-43019027 protein_coding
ENST00000590924 (VAT1-005) 43017832-43025123 protein_coding
ENST00000592388 (VAT1-009) 43014607-43016313 nonsense_mediated_decay
CIL_00063T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000010358-ENSMUSG00000034993 CGP 10090 11:101448407-101466230
GeneTranscriptPositionBiotype
ENSMUSG00000001313 (Rnd2)
Rho family GTPase 2 		ENSMUST00000001347 (Rnd2-001) 101468175-101471853 protein_coding
ENSMUST00000134980 (Rnd2-003) 101465484-101471105 processed_transcript
ENSMUST00000153185 (Rnd2-002) 101464999-101471853 processed_transcript
ENSMUSG00000010358 (Ifi35)
interferon-induced protein 35 		ENSMUST00000010502 (Ifi35-001) 101448407-101458698 protein_coding
ENSMUST00000125958 (Ifi35-002) 101448444-101458125 retained_intron
ENSMUST00000131024 (Ifi35-003) 101448570-101458464 nonsense_mediated_decay
ENSMUSG00000034993 (Vat1)
vesicle amine transport protein 1 homolog (T californica) 		ENSMUST00000040430 (Vat1-001) 101458745-101466230 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063T_0001ENSG00000068079ENST00000246911ENST00000396722ENST00000415816ENST00000438323ENST00000534876ENST00000536969ENST00000538473ENST00000546325ENSG00000108828ENST00000355653ENST00000420567ENST00000587062ENST00000587147ENST00000587173ENST00000589709ENST00000589828ENST00000590924ENST00000592388CIL_00063T_0002ENSMUSG00000001313ENSMUST00000001347ENSMUST00000134980ENSMUST00000153185ENSMUSG00000010358ENSMUST00000010502ENSMUST00000125958ENSMUST00000131024ENSMUSG00000034993ENSMUST00000040430
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063T_0001ENSG00000068079ENST00000246911ENST00000396722ENST00000415816ENST00000438323ENST00000534876ENST00000546325ENSG00000108828ENST00000355653ENST00000589709ENST00000592388CIL_00063T_0002ENSMUSG00000001313ENSMUST00000001347ENSMUST00000134980ENSMUST00000153185ENSMUSG00000010358ENSMUST00000010502ENSMUST00000125958ENSMUST00000131024ENSMUSG00000034993ENSMUST00000040430
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000068079 ENST00000246911 N/A N/A N/A N/A N/A 1.477±0.00 N/A N/A N/A N/A 0.607±0.00 1.254±0.00 N/A N/A
ENST00000396722 N/A N/A N/A 1.510±0.00 N/A N/A N/A N/A N/A N/A 0.616±0.00 N/A N/A N/A
ENST00000415816 5.774±0.00 14.668±0.00 0.926±0.00 1.467±0.00 9.234±0.00 9.648±0.00 N/A N/A 0.493±0.00 12.401±0.00 N/A 15.092±2.29 8.122±1.34 1.819±0.29
ENST00000438323 9.600±0.00 7.877±0.00 N/A 4.624±0.00 9.153±0.00 7.561±0.00 3.566±2.20 9.429±5.45 4.172±3.74 2.301±0.37 2.500±0.00 12.625±5.97 16.305±4.95 4.611±3.84
ENST00000534876 N/A N/A N/A N/A N/A N/A N/A N/A 0.593±0.00 N/A 1.468±0.00 28.929±0.00 23.507±0.00 N/A
ENST00000536969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546325 N/A N/A N/A N/A 1.569±0.00 N/A N/A N/A N/A N/A N/A 24.398±0.00 22.176±0.00 3.159±0.00
ENSG00000108828 ENST00000355653 269.554±0.00 45.601±0.00 1.257±0.00 15.033±14.03 59.164±55.25 78.781±74.04 13.837±11.70 60.918±0.00 13.902±10.12 67.691±60.88 19.880±0.00 85.125±74.68 88.977±37.77 70.394±51.19
ENST00000420567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589709 N/A N/A 7.344±0.00 5.153±0.00 N/A N/A N/A N/A 15.474±0.00 8.532±0.00 1.892±0.00 18.000±0.00 N/A N/A
ENST00000589828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592388 N/A 33.593±0.00 N/A N/A N/A N/A N/A N/A 13.004±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001313 ENSMUST00000001347 N/A N/A N/A 70.469±20.09 N/A N/A 3.732±0.00 7.123±0.00 6.695±3.43 N/A 1.347±0.12 33.584±6.94 74.941±37.49 8.227±2.89
ENSMUST00000134980 N/A N/A N/A 40.303±0.00 N/A N/A N/A N/A N/A N/A N/A 38.641±0.00 57.706±0.00 N/A
ENSMUST00000153185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.550±1.62 1.210±0.00
ENSMUSG00000010358 ENSMUST00000010502 21.293±4.71 15.216±3.49 19.852±3.53 0.491±0.17 13.716±3.90 13.196±1.61 5.925±1.15 9.188±0.39 16.126±3.60 21.523±1.34 5.379±0.51 13.053±2.91 11.588±3.02 1.107±0.23
ENSMUST00000125958 N/A N/A N/A 0.207±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131024 11.207±1.78 10.339±2.58 10.240±2.17 0.760±0.47 8.972±2.22 7.626±1.42 3.688±1.00 3.297±0.36 6.572±2.56 14.689±1.30 1.989±0.57 8.024±7.55 14.452±12.62 0.640±0.20
ENSMUSG00000034993 ENSMUST00000040430 57.469±18.36 41.077±12.04 73.230±13.49 38.272±25.74 56.131±19.58 46.639±8.51 9.596±0.61 22.093±4.06 10.436±2.26 92.186±7.43 4.474±0.91 59.754±15.80 64.967±20.74 5.944±2.56

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