C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppression of tumorigenicity 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438863 ST7-015 ENSG00000004866 9606 + 7:116953347-117138532 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000438863
Transcript ID Breast
ENST00000438863 4.695±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QV CIL_0003QV_0001 CGP 7:116811070-117230103
CIL_0003QW CIL_0003QW_0001 CGP 7:116953238-117323289

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125673 St7-024 nonsense_mediated_decay Mus_musculus 0 1179
ENSMUST00000144488 St7-012 nonsense_mediated_decay Mus_musculus 0 902
ENSMUST00000115417 St7-003 protein_coding Mus_musculus 0 900
ENSMUST00000000674 St7-018 protein_coding Mus_musculus 0 900
ENSMUST00000127181 St7-015 processed_transcript Mus_musculus 0 900
ENSMUST00000115418 St7-014 protein_coding Mus_musculus 0 900
ENSMUST00000052113 St7-007 protein_coding Mus_musculus 0 900
ENSMUST00000115420 St7-011 protein_coding Mus_musculus 0 900
ENSMUST00000154497 St7-021 processed_transcript Mus_musculus 0 662
ENSMUST00000140358 St7-006 retained_intron Mus_musculus 0 566
ENSMUST00000154059 St7-005 retained_intron Mus_musculus 0 566
ENSMUST00000053148 St7-001 protein_coding Mus_musculus 0 566
ENSMUST00000138726 St7-002 processed_transcript Mus_musculus 0 566
ENSMUST00000077080 St7-017 protein_coding Mus_musculus 0 566
ENSMUST00000144021 St7-016 processed_transcript Mus_musculus 0 566
ENSMUST00000081635 St7-010 protein_coding Mus_musculus 0 566
ENSMUST00000115419 St7-009 protein_coding Mus_musculus 0 566
ENSMUST00000130084 St7-020 processed_transcript Mus_musculus 0 327
ENSMUST00000132175 St7-004 retained_intron Mus_musculus 0 243

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