C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439688 RP13-39P12.2-001 ENSG00000213513 9606 - 10:77780337-77781876 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000439688
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000439688 0.052±0.00 0.085±0.00 0.327±0.08 0.178±0.14 0.104±0.00 0.274±0.20 0.052±0.00 0.073±0.00 0.721±0.00 0.065±0.02 0.183±0.12 1.289±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CA CIL_0004CA_0001 CGP 10:76869601-77926526

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162099 Impdh1-002 protein_coding Mus_musculus 0 1655
ENSMUST00000159124 Impdh1-003 protein_coding Mus_musculus 0 1655
ENSMUST00000078155 Impdh1-001 protein_coding Mus_musculus 0 1655
ENSMUST00000162739 Impdh1-004 protein_coding Mus_musculus 0 1546
ENSMUST00000160878 Impdh1-005 protein_coding Mus_musculus 0 1334
ENSMUST00000161654 Impdh1-008 retained_intron Mus_musculus 0 556
ENSMUST00000162242 Impdh1-010 protein_coding Mus_musculus 0 525
ENSMUST00000162215 Impdh1-007 protein_coding Mus_musculus 0 490
ENSMUST00000160749 Impdh1-006 protein_coding Mus_musculus 0 231
ENSMUST00000160613 Impdh1-009 retained_intron Mus_musculus 0 213

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