C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: inosine 5'-phosphate dehydrogenase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078155 Impdh1-001 ENSMUSG00000003500 10090 - 6:29200437-29212297 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078155
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078155 14.954±1.58 11.769±4.39 9.629±0.23 17.372±0.38 9.511±2.92 7.758±2.17 6.570±0.78 3.498±0.50 1.846±1.11 37.532±3.45 4.135±0.74 25.174±4.92 7.286±3.29 1.976±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OE CIL_0001OE_0002 CGP 6:29169232-29216364

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 ISS nucleic acid binding
GO:0003677 ISS DNA binding
GO:0003938 IDA IMP dehydrogenase activity
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006164 IMP purine nucleotide biosynthetic process
GO:0006177 IEA GMP biosynthetic process
GO:0030554 IEA adenyl nucleotide binding
GO:0046651 IMP lymphocyte proliferation
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338791 IMPDH1-005 protein_coding Homo_sapiens 0 2494
ENST00000348127 IMPDH1-002 protein_coding Homo_sapiens 0 2481
ENST00000354269 IMPDH1-001 protein_coding Homo_sapiens 0 2494
ENST00000395148 CFLAR-005 protein_coding Homo_sapiens 0 1877
ENST00000399037 AC008265.2-001 processed_pseudogene Homo_sapiens 0 1655
ENST00000407347 RP11-528A10.1-001 unprocessed_pseudogene Homo_sapiens 0 784
ENST00000413639 AC090945.1-001 processed_pseudogene Homo_sapiens 0 1574
ENST00000418838 RP6-186E3.1-001 processed_pseudogene Homo_sapiens 0 1816
ENST00000419067 IMPDH1-003 protein_coding Homo_sapiens 0 2335
ENST00000435838 RP11-537H15.4-001 processed_pseudogene Homo_sapiens 0 1711
ENST00000437208 AC018735.1-001 processed_pseudogene Homo_sapiens 0 976
ENST00000439688 RP13-39P12.2-001 processed_pseudogene Homo_sapiens 0 1655
ENST00000440965 IMPDH1P10-001 processed_pseudogene Homo_sapiens 0 1533
ENST00000445028 IMPDH1P4-001 processed_pseudogene Homo_sapiens 0 989
ENST00000460045 IMPDH1-015 retained_intron Homo_sapiens 0 305
ENST00000468842 IMPDH1-011 retained_intron Homo_sapiens 0 449
ENST00000469328 IMPDH1-013 nonsense_mediated_decay Homo_sapiens 0 2370
ENST00000470772 IMPDH1-016 protein_coding Homo_sapiens 0 2259
ENST00000473463 IMPDH1-006 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000480861 IMPDH1-009 protein_coding Homo_sapiens 0 2180
ENST00000484496 IMPDH1-014 nonsense_mediated_decay Homo_sapiens 0 2300
ENST00000489263 IMPDH1-012 protein_coding Homo_sapiens 0 348
ENST00000491376 IMPDH1-004 retained_intron Homo_sapiens 0 472
ENST00000496200 IMPDH1-008 protein_coding Homo_sapiens 0 2023
ENST00000496487 IMPDH1-010 retained_intron Homo_sapiens 0 536
ENST00000497868 IMPDH1-007 protein_coding Homo_sapiens 0 953
ENST00000520656 IMPDH1P6-001 processed_pseudogene Homo_sapiens 0 1620
ENST00000521903 ATAD2-002 protein_coding Homo_sapiens 0 492
ENST00000567885 IMPDH1P11-001 processed_pseudogene Homo_sapiens 0 1386

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