C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | solute carrier family 6 (neurotransmitter transporter), member 8 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000442457  |
SLC6A8-009 |
ENSG00000130821 |
9606 | + |
X:153693267-153694420  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001UZ | CIL_0001UZ_0001 | CGP | X:153642492-153689010 |
| CIL_0001UY | CIL_0001UY_0001 | CGP | X:153669730-153696593 |
| CIL_0001UX | CIL_0001UX_0001 | CGP | X:153688099-153724697 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005328 | IEA | neurotransmitter:sodium symporter activity |
| GO:0006836 | IEA | neurotransmitter transport |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000164449
|
Slc6a8-006 | protein_coding | Mus_musculus | 0 | 734 |
|
ENSMUST00000114467
|
Slc6a8-201 | protein_coding | Mus_musculus | 0 | 590 |
|
ENSMUST00000170614
|
Slc6a8-009 | retained_intron | Mus_musculus | 0 | 590 |
|
ENSMUST00000114464
|
Slc6a8-004 | nonsense_mediated_decay | Mus_musculus | 0 | 590 |
|
ENSMUST00000114465
|
Slc6a8-002 | protein_coding | Mus_musculus | 0 | 590 |
|
ENSMUST00000168831
|
Slc6a8-003 | protein_coding | Mus_musculus | 0 | 536 |
|
ENSMUST00000033752
|
Slc6a8-001 | protein_coding | Mus_musculus | 0 | 525 |
|
ENSMUST00000167828
|
Slc6a8-014 | retained_intron | Mus_musculus | 0 | 420 |
|
ENSMUST00000166200
|
Slc6a8-010 | processed_transcript | Mus_musculus | 0 | 370 |
|
ENSMUST00000170574
|
Slc6a8-015 | retained_intron | Mus_musculus | 0 | 292 |
|
ENSMUST00000168764
|
Slc6a8-013 | retained_intron | Mus_musculus | 0 | 255 |
|
ENSDART00000041794
|
slc6a6a-201 | protein_coding | Danio_rerio | 1e-23 | 113 |
|
ENSDART00000146306
|
slc6a6a-001 | protein_coding | Danio_rerio | 1e-23 | 113 |
