C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 6 (neurotransmitter transporter, creatine), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114464 Slc6a8-004 ENSMUSG00000019558 10090 + X:73676846-73682502 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000114464
Transcript ID Bladder Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000114464 8.226±0.80 9.301±3.42 4.193±0.63 11.075±0.79 18.302±2.35 0.473±0.20 7.184±1.04 16.736±9.10 0.422±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UY CIL_0001UY_0002 CGP X:73655994-73682502
CIL_0001UX CIL_0001UX_0002 CGP X:73673150-73716175

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253122 SLC6A8-002 protein_coding Homo_sapiens 0 2074
ENST00000330048 SLC6A10P-002 processed_transcript Homo_sapiens 0 671
ENST00000413787 SLC6A8-008 protein_coding Homo_sapiens 0 272
ENST00000429147 SLC6A8-006 protein_coding Homo_sapiens 0 215
ENST00000430077 SLC6A8-005 protein_coding Homo_sapiens 0 1897
ENST00000431994 SLC6A10P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1775
ENST00000442457 SLC6A8-009 protein_coding Homo_sapiens 0 590
ENST00000457723 SLC6A8-001 protein_coding Homo_sapiens 0 337
ENST00000466243 SLC6A8-010 processed_transcript Homo_sapiens 2.8026e-45 185
ENST00000467402 SLC6A8-007 processed_transcript Homo_sapiens 0 228
ENST00000485324 SLC6A8-003 processed_transcript Homo_sapiens 0 773
ENST00000568600 RP11-598D12.4-001 unprocessed_pseudogene Homo_sapiens 0 804
ENST00000611339 AC136616.1-202 protein_coding Homo_sapiens 0 1945
ENST00000613216 AC136616.1-201 protein_coding Homo_sapiens 0 1945

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