C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 6 (neurotransmitter transporter, creatine), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033752 Slc6a8-001 ENSMUSG00000019558 10090 + X:73673150-73682502 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000033752
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000033752 2.669±0.00 13.251±4.57 10.676±0.51 3.499±1.22 5.521±0.46 59.294±19.84 12.106±2.05 26.728±6.85 0.289±0.12 7.279±2.87 8.993±1.47 9.841±2.45 16.073±11.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UY CIL_0001UY_0002 CGP X:73655994-73682502
CIL_0001UX CIL_0001UX_0002 CGP X:73673150-73716175

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005308 IEA creatine transmembrane transporter activity
GO:0005309 IEA creatine:sodium symporter activity
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005887 IEA integral component of plasma membrane
GO:0006814 IEA sodium ion transport
GO:0006836 IEA neurotransmitter transport
GO:0015220 IEA choline transmembrane transporter activity
GO:0015871 IEA choline transport
GO:0015881 IEA creatine transport
GO:1902598 IEA creatine transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000129303 SLC6A3-201 protein_coding Danio_rerio 0.000000003 69
ENST00000253122 SLC6A8-002 protein_coding Homo_sapiens 0 3319
ENST00000254488 SLC6A11-001 protein_coding Homo_sapiens 0.000000000000002 90
ENST00000330048 SLC6A10P-002 processed_transcript Homo_sapiens 0 675
ENST00000413787 SLC6A8-008 protein_coding Homo_sapiens 0 207
ENST00000429147 SLC6A8-006 protein_coding Homo_sapiens 0 329
ENST00000430077 SLC6A8-005 protein_coding Homo_sapiens 0 2379
ENST00000431994 SLC6A10P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 2531
ENST00000442457 SLC6A8-009 protein_coding Homo_sapiens 0 525
ENST00000454147 SLC6A11-002 protein_coding Homo_sapiens 0.000000000000001 90
ENST00000457723 SLC6A8-001 protein_coding Homo_sapiens 0 337
ENST00000466243 SLC6A8-010 processed_transcript Homo_sapiens 0 532
ENST00000467402 SLC6A8-007 processed_transcript Homo_sapiens 0 233
ENST00000476466 SLC6A8-004 processed_transcript Homo_sapiens 0 377
ENST00000485324 SLC6A8-003 processed_transcript Homo_sapiens 0 773
ENST00000561837 SLC6A10P-003 processed_transcript Homo_sapiens 0 226
ENST00000568600 RP11-598D12.4-001 unprocessed_pseudogene Homo_sapiens 0 741
ENST00000611339 AC136616.1-202 protein_coding Homo_sapiens 0 2416
ENST00000613216 AC136616.1-201 protein_coding Homo_sapiens 0 2957

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