C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: myocardin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443061 MYOCD-005 ENSG00000141052 9606 + 17:12744351-12765329 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YN CIL_0007YN_0001 VISTA 17:12172466-12773269
CIL_0008QC CIL_0008QC_0001 VISTA 17:12429509-13031929

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003713 IEA transcription coactivator activity
GO:0005634 IEA nucleus
GO:2000727 IEA positive regulation of cardiac muscle cell differentiation
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108695 Myocd-201 protein_coding Mus_musculus 0 976
ENSMUST00000101042 Myocd-002 protein_coding Mus_musculus 0 976
ENSMUST00000102635 Myocd-001 protein_coding Mus_musculus 0 845

Loading