C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SHC (Src homology 2 domain containing) transforming protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444179 SHC1-005 ENSG00000160691 9606 - 1:154966425-154968874 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungMuscleOvaryENST00000444179
Transcript ID Brain Breast Colon Heart Liver Lung Muscle Ovary
ENST00000444179 5.763±0.00 22.416±0.00 15.776±0.00 4.963±0.00 13.739±0.00 10.075±0.00 4.756±0.00 14.823±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000191485 Shc1-201 protein_coding Mus_musculus 0 717
ENSMUST00000137793 Shc1-008 protein_coding Mus_musculus 0 717
ENSMUST00000094378 Shc1-002 protein_coding Mus_musculus 0 717
ENSMUST00000107417 Shc1-003 protein_coding Mus_musculus 0 717
ENSMUST00000039110 Shc1-001 protein_coding Mus_musculus 0 717
ENSMUST00000125036 Shc1-005 protein_coding Mus_musculus 0 632
ENSMUST00000146306 Shc1-009 processed_transcript Mus_musculus 0 388
ENSMUST00000128238 Shc1-007 protein_coding Mus_musculus 0 388

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