C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SKI/DACH domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444772 SKIDA1-201 ENSG00000180592 9606 - 10:21515016-21517919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000444772
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000444772 0.521±0.00 0.179±0.11 0.277±0.15 0.158±0.07 0.303±0.04 0.143±0.00 0.044±0.00 0.075±0.02 0.724±0.00 0.747±0.51 1.130±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096N CIL_00096N_0001 VISTA 10:21215719-21816526
CIL_000781 CIL_000781_0002 CGP 10:21513478-21743630

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091420 Skida1-001 protein_coding Mus_musculus 0 2712
ENSMUST00000066885 Skida1-201 protein_coding Mus_musculus 0 2669
ENSMUST00000142856 Skida1-003 protein_coding Mus_musculus 0 1173
ENSMUST00000152908 Skida1-002 protein_coding Mus_musculus 0 520

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