C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445066 AC073109.2-001 ENSG00000235920 9606 - 7:11820317-11821294 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000445066
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000445066 0.055±0.00 0.131±0.00 0.134±0.09 0.342±0.30 0.014±0.00 0.101±0.01 0.030±0.00 0.583±0.00 0.514±0.50 0.013±0.00 0.630±0.00 0.316±0.00 0.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022R CIL_00022R_0001 CGP 7:11370357-12243367

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080919 Thrap3-001 protein_coding Mus_musculus 0 793
ENSMUST00000121016 Gm5898-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000163176 Thrap3-014 nonsense_mediated_decay Mus_musculus 0 394
ENSMUST00000163459 Thrap3-015 protein_coding Mus_musculus 0 324
ENSMUST00000140390 Thrap3-002 processed_transcript Mus_musculus 0 196

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