C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ribosomal protein S9 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000445961  |
RPS9-007 |
ENSG00000170889 |
9606 | + |
19:54200872-54207647  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005M6 | CIL_0005M6_0001 | CGP | 19:54189938-54249003 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003723 | IEA | RNA binding |
| GO:0003735 | IEA | structural constituent of ribosome |
| GO:0005622 | IEA | intracellular |
| GO:0006412 | IEA | translation |
| GO:0015935 | IEA | small ribosomal subunit |
| GO:0019843 | IEA | rRNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000146927
|
Rps9-009 | nonsense_mediated_decay | Mus_musculus | 0 | 819 |
|
ENSMUST00000108623
|
Rps9-002 | protein_coding | Mus_musculus | 0 | 621 |
|
ENSMUST00000126562
|
Rps9-004 | protein_coding | Mus_musculus | 0 | 494 |
|
ENSMUST00000108625
|
Rps9-008 | protein_coding | Mus_musculus | 0 | 494 |
|
ENSMUST00000006496
|
Rps9-001 | protein_coding | Mus_musculus | 0 | 494 |
|
ENSMUST00000136858
|
Rps9-010 | retained_intron | Mus_musculus | 0 | 350 |
|
ENSMUST00000120147
|
Gm14034-001 | processed_pseudogene | Mus_musculus | 0 | 287 |
|
ENSMUST00000108624
|
Rps9-003 | protein_coding | Mus_musculus | 0 | 217 |
