C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated) pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446621 SFPQP1-001 ENSG00000224035 9606 + Y:13083790-13095805 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000446621
Transcript ID Testis
ENST00000446621 0.006±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021T CIL_00021T_0002 CGP Y:12904937-13480673

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030623 Sfpq-001 protein_coding Mus_musculus 0 586
ENSMUST00000146285 Sfpq-006 processed_transcript Mus_musculus 0 442
ENSMUST00000140682 Sfpq-002 processed_transcript Mus_musculus 0 361
ENSMUST00000143168 Sfpq-003 processed_transcript Mus_musculus 0 311
ENSMUST00000125453 Sfpq-004 processed_transcript Mus_musculus 1.99993e-41 174

Loading